Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03014 ATGAATACAAAGATTGAACTGCCACCAGGTTTCAGGTTTCATCCAACAGATGAAGAGCTCATAACTCACTACCTCTCTCAGAAGGTTGTTGCTAGCTGCTTCTATGCAACTGCCATTATTGGAGAGGCTGATTTCAACAAGTGTGAGCCTTGGGATTTACCTTGGAGGGGCAAAATGGGAGAAAAAGAATGGTATTTTTTCTGTTTGAAGGACAAAAAATACCCAACAGGTGAAAGGACAAATAGAGCCACTGGTGCTGGGTACTGGAAGGCCACAGGAAAAGACAGAGAGATATACAATGCAAAAGCAAAAGCACTTATTGGGATGAAGAAAACACTTGTTTTCTACAAAGGAAGAGCTCCAAATGGTGAAAAGACAAATTGGGTCATGCATGAATATAGGTTGGAAGGCGATAATAAACCTTCTATATACAATCTTCCCAAAACAACCAAGAAAGAGTGGGCTTTGTGCAGAGTTCTACACAAAAGTGAAAAGAAAGTAATGCATGTTCCACAACCACAGGGATTGGTTGAGTTCAGCTCTTATGAAAATAAGGAACTTCCCCAATTGATGGATTCTTCACAAGTAACATTCTTTTCATCAGACCCAAATAATCAAAATTTAGACACCCTTAACCCTGCCACATGGGATATTTCCGAAAATGCCCCTACAAGTAATGCGTCTAAGGAGACGGACTTTGATGCTGACATGTTCTCTTTGATGTACAACAATAGAGAAGTGTTCCAAACATCATTTGAGAATCAGGAATATTATGCATATGATTCTATGGGACATGTGGACAATGGTTCCCTATGGAATTTTTAG 825 0.3964 MNTKIELPPGFRFHPTDEELITHYLSQKVVASCFYATAIIGEADFNKCEPWDLPWRGKMGEKEWYFFCLKDKKYPTGERTNRATGAGYWKATGKDREIYNAKAKALIGMKKTLVFYKGRAPNGEKTNWVMHEYRLEGDNKPSIYNLPKTTKKEWALCRVLHKSEKKVMHVPQPQGLVEFSSYENKELPQLMDSSQVTFFSSDPNNQNLDTLNPATWDISENAPTSNASKETDFDADMFSLMYNNREVFQTSFENQEYYAYDSMGHVDNGSLWNF 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03014 274 SUPERFAMILY NAC domain 5 162 IPR036093 GO:0003677|GO:0006355
Arst10g03014 274 Gene3D NAC domain 16 168 IPR036093 GO:0003677|GO:0006355
Arst10g03014 274 FunFam NAC domain-containing protein 100-like 16 166 - -
Arst10g03014 274 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 219 - -
Arst10g03014 274 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Arst10g03014 274 ProSiteProfiles NAC domain profile. 7 162 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03014 Arst-Chr10 98159605 98162082 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03014 5 274 NAC Transcription Factor Family AT5G39610 52.920 4.33e-88 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst10g03014 NAM 6.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03014 - - ahf:112784292 481.87