Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03013 ATGAATACAAAGATTGAACTGCCACCAGGTTTCAGGTTTCATCCAACAGATGAAGAGCTCATAACTCACTACCTCTCTCAGAAGGTTGTTGCTAGCTGCTTCTATGCAACTGCCATTATTGGAGAGGCTGATTTCAACAAGTGTGAGCCTTGGGATTTACCTTGGAGGGGCAAAATGGGAGAAAAAGAATGGTATTTTTTCTGTTTGAAGGACAAAAAATACCCAACAGGTGAAAGGACAAATAGAGCCACTGGTGCTGGGTACTGGAAGGCCACAGGAAAAGACAGAGAGATATACAATGCAAAAGCAAAAGCACTTATTGGGATGAAGAAAACACTTGTTTTCTACAAAGGAAGAGCTCCAAATGGTGAAAAGACAAATTGGGTCATGCATGAATATAGGTTGGAAGGCGATAATAAACCTTCTATATACAATCTTCCCAAAACAACCAAGAAAGAGTGGGCTTTGTGCAGAGTTCTACACAAAAGTGAAAAGAAAGTAATGCATGTTCCACAACCACAGGGATTGGTTGAGTTCAGCTCTTATGAAAATAAGGAACTTCCCCAATTGATGGATTCTTCACAAGTAACATTCTTTTCATCAGACCCAAATAATCAAAGTGAGGATCCAAATCCAATCACACGTGATGATGATAATAATAATAATGATGACATCATAGTTGATAGCATTGAAACTCCTTTCTTGGAACAACAACCACCTTATTATTCTTCATCCTATGATTCTTCAGATTTAGACACCCTTAACCCTGCCACATGGGATATTTCCGAAAATGCCCCTACAAGTAATGCGTCTAAGGAGACGGACTTTGATGCTGACATGTTCTCTTTGATGTACAACAATAGAGAAGTGTTCCAAACATCATTTGAGAATCAGGAATATTATGCATATGATTCTATGGGACATGTGGACAATGGTTCCCTATGGAATTTTTAG 954 0.3889 MNTKIELPPGFRFHPTDEELITHYLSQKVVASCFYATAIIGEADFNKCEPWDLPWRGKMGEKEWYFFCLKDKKYPTGERTNRATGAGYWKATGKDREIYNAKAKALIGMKKTLVFYKGRAPNGEKTNWVMHEYRLEGDNKPSIYNLPKTTKKEWALCRVLHKSEKKVMHVPQPQGLVEFSSYENKELPQLMDSSQVTFFSSDPNNQSEDPNPITRDDDNNNNDDIIVDSIETPFLEQQPPYYSSSYDSSDLDTLNPATWDISENAPTSNASKETDFDADMFSLMYNNREVFQTSFENQEYYAYDSMGHVDNGSLWNF 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03013 317 FunFam NAC domain-containing protein 100-like 16 166 - -
Arst10g03013 317 MobiDBLite consensus disorder prediction 196 210 - -
Arst10g03013 317 Gene3D NAC domain 16 168 IPR036093 GO:0003677|GO:0006355
Arst10g03013 317 ProSiteProfiles NAC domain profile. 7 162 IPR003441 GO:0003677|GO:0006355
Arst10g03013 317 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Arst10g03013 317 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 233 - -
Arst10g03013 317 MobiDBLite consensus disorder prediction 196 225 - -
Arst10g03013 317 SUPERFAMILY NAC domain 5 162 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03013 Arst-Chr10 98159605 98162082 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03013 5 201 NAC Transcription Factor Family AT5G39610 65.482 7.26e-85 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst10g03013 NAM 8.9e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03013 - - ahf:112784292 551.206