Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02991 ATGCATGGTCCCAAAATGTGTCAGGTCTTGATGTTGACTGACCTCTCTATTTATTCAGTCTACAACTCGCCCCTCAATTTCCTCAAACCCAACTTCTTCTTTCATCAATCTAACTTAACTCCCTGCTTCTTAAGGAAATTGATGGCTCTTCTTGGGTTCCTTCTTCTGGTGTTTATCTCCATGCTCTCATATGTTAGTGCCTATGGATATGGTGGTTGGATCAATGCACATGCCACATTCTATGGTGGTAGTGATGCTTCTGGAACAATGGGTGGAGCTTGTGGATATGGAAACTTGTACAGCCAAGGGTGTGGGACAAACACAGCAGCACTAAGCACAGCATTGTTCAACAATGGATTAAGCTGTGGAGCATGTTATGAAATAAGGTGTGCAAATGACCCACAGTGGTGTTCTCCTGCCTCAATTGTAGTAACCGCCACTAACTTCTGCCCCCCTGGTGGTTGGTGTGACCCTCCAAATCACCATTTTGATCTCTCTCAGCCTGTTTTTCAGCAAATTGCTCAGTATAAAGCTGGCGTTGTTCCTGTCATTTACAGAAGGGTGAGGTGCAAGAGAAGAGGGGGAATAAGGTTCACCATAAATGGCCACCCATACTTCAATTTAGTCCTAGTAACAAATGTTGGAGGTGCTGGTGATGTGCATGGTGTAGCCATCAAAGGTTCAAGAACTAGATGGCAAGCAATGTCAAGAAACTGGGGGCAAAATTGGCAAAGCAACTCTTACTTGAATGGACAAAGCCTTTCATTTGTAGTTACCACAAGTAATGGCCACAGTGTGGTATCTTACAATGTTGCCCCTCCAAGTTGGTCCTTTGGACAGACCTACACTGGAAGACAATTCCCTTAA 867 0.4441 MHGPKMCQVLMLTDLSIYSVYNSPLNFLKPNFFFHQSNLTPCFLRKLMALLGFLLLVFISMLSYVSAYGYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGCGTNTAALSTALFNNGLSCGACYEIRCANDPQWCSPASIVVTATNFCPPGGWCDPPNHHFDLSQPVFQQIAQYKAGVVPVIYRRVRCKRRGGIRFTINGHPYFNLVLVTNVGGAGDVHGVAIKGSRTRWQAMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPSWSFGQTYTGRQFP 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02991 288 CDD DPBB_EXPA_N 72 190 - -
Arst10g02991 288 PANTHER EXPANSIN-A15 54 287 IPR002963 GO:0009664
Arst10g02991 288 SUPERFAMILY PHL pollen allergen 192 284 IPR036749 -
Arst10g02991 288 SUPERFAMILY Barwin-like endoglucanases 72 213 IPR036908 -
Arst10g02991 288 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 91 195 IPR007112 -
Arst10g02991 288 Pfam Lytic transglycolase 108 185 IPR009009 -
Arst10g02991 288 Pfam Expansin C-terminal domain 196 273 IPR007117 -
Arst10g02991 288 FunFam Expansin 195 287 - -
Arst10g02991 288 FunFam Expansin 62 191 - -
Arst10g02991 288 PRINTS Expansin/Lol pI family signature 72 87 IPR007118 GO:0005576
Arst10g02991 288 PRINTS Expansin/Lol pI family signature 90 108 IPR007118 GO:0005576
Arst10g02991 288 PRINTS Expansin/Lol pI family signature 270 284 IPR007118 GO:0005576
Arst10g02991 288 PRINTS Expansin/Lol pI family signature 232 246 IPR007118 GO:0005576
Arst10g02991 288 PRINTS Expansin/Lol pI family signature 112 130 IPR007118 GO:0005576
Arst10g02991 288 PRINTS Expansin/Lol pI family signature 178 194 IPR007118 GO:0005576
Arst10g02991 288 Gene3D - 59 191 IPR036908 -
Arst10g02991 288 Gene3D - 195 287 IPR036749 -
Arst10g02991 288 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 205 284 IPR007117 -
Arst10g02991 288 PRINTS Expansin signature 170 183 IPR002963 GO:0009664
Arst10g02991 288 PRINTS Expansin signature 130 141 IPR002963 GO:0009664
Arst10g02991 288 PRINTS Expansin signature 270 286 IPR002963 GO:0009664
Arst10g02991 288 PRINTS Expansin signature 103 117 IPR002963 GO:0009664
Arst10g02991 288 PRINTS Expansin signature 142 152 IPR002963 GO:0009664
Arst10g02991 288 PRINTS Expansin signature 241 262 IPR002963 GO:0009664
Arst10g02991 288 PRINTS Expansin signature 206 227 IPR002963 GO:0009664
Arst10g02991 288 PRINTS Expansin signature 194 206 IPR002963 GO:0009664
Arst10g02991 288 PRINTS Expansin signature 153 170 IPR002963 GO:0009664
Arst10g02991 288 SMART dpbb_1 108 185 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02991 Arst-Chr10 98010716 98013341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02991 48 287 Expansin Gene Family AT2G03090 77.016 1.07e-137 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02991 K20628 - qsa:O6P43_004469 454.136