Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02974 ATGGCTGAAGGTGTTAGTGAAGCAAACAATACTAAAGCGTCGCCATCGCCATTGCCACCAGAAGCAGAGAAGAAGAAAGAACAAAGCCTACCATTTTTCAAGCTCTTCTCATTTGCAGACAAGTATGACTACATGCTCATGATCTCTGGAACCATCGGCGCCATTGTTCATGGCTCCTCCATGCCCGTTTTCTTCCTCCTCTTCGGTCAAATGGTCAACGGTTTTGGTAAGAACCAAATGGACCTTAACAAGATGACTCAGGAAGTCTCAACGTATGCTCTTTACTTTGTGTACCTTGGCCTTGTGGTTTGCATATCATCATATGCAGAAATTTCATGCTGGATGTATAGTGGGGAGAGGCAAGTGAGTACACTAAGGAAGAAGTATTTGGAAGCAGTGCTTAAACAAGACGTAGGTTTCTTTGATACAGATGCAAGAACAGGGGATATTGTTTTCAGTGTCTCAACGGACACACTTCTTGTTCAAGATGCCATCAGTGAGAAGGTTGGGAACTTCATACATTATCTTTCAACTTTTCTGGCTGGACTTGTGGTTGGTTTTGTGTCCGCATGGAGGCTAGCACTTCTAAGTGTTGCCGTGATTCCCGGCATCGCTTTCGCCGGCGGCTTGTATGCTTACACTCTTACCGGCCTTACATCCAAGAGTCGCGAATCCTATGCCAATGCAGGCATCATTGCCGAACAGGCCATTGCGCAAGTTCGAACCGTTTACTCTTACGTTGGGGAGAGCAAGGCGCTGAACTCTTATTCAGATGCAATACAGAACACTCTGAAGCTTGGATATAACGGCGTTTTCATCCGAAATGGACAGACCGACGGAGGCAAGGCGTTCACGGCTATATTCTCGGCCATTGTTGGTGGAATGAGTTTGGGACAGTCTTTTTCGAATTTAGGCGCCTTTAGTAAAGGCAAAGCGGCCGGATACAAGTTAATGGAGATCATCAAGCAGAAACCAACAATTGTGGAGGATCCTTTGGAAGGCAAGTGCTTGGGAGAGGTTAATGGAAACATTGAATTCAAGGATGTTGGTTTTAGCTATCCCTCGCGGCCGGATGTCATGATCTTTCGCAATTTCTCAATCTTTTTCCCGGCCGGGAAAACAGTGGCGGTTGTAGGTGGTAGTGGATCAGGAAAGAGTACAGTTGTTTCCTTGATTGAAAGGTTCTATGATCCAAATGAAGGTCAAGTTCTGCTTGATAATGTGGACATCAAGACACTGCAACTAAAATGGTTGCGCGATCAAATCGGATTGGTGAATCAAGAACCTGCGCTGTTCGCAACCACCATTCTTGAGAACATACTCTATGGAAAACCTGATGCAACAATGGCTGAAGTGGAAGCAGCAGCTTCTGCTGCAAATGCTCATAGCTTTATTACCTTGCTTCCCAACGGCTATAACACTCAGGTGGGAGAACGAGGAGTGCAATTATCCGGAGGCCAAAAGCAGAGAATTGCAATTGCAAGAGCAATGTTGAAGAATCCAAAGATTCTGCTTTTGGATGAGGCAACAAGTGCTCTAGATGCAGGATCAGAGAGCATTGTTCAAGAGGCACTAGACCGGCTCATGGTGGGAAGAACAACCGTGGTTGTAGCGCATCGTCTTTCGACCATAAGAAATGTTGATACCATCGCCGTGATCCAGCAAGGACAAGTGGTGGAGACAGGAACACACGAGGAACTCATTGCCAAGGCAGGAACCTATGCATCACTAATTAGGTTCCAAGAAATGGTTGGAAATAGGGACTTCTCCAACCCCTCAACTCGCCGGACACGATCCTCCCGGCTCAGCCATTCCCTCTCTACAAAGTCCTTAAGCCTCCGATCTGGAAGCTTAAGGAACTTGAGCTACCAATACAGCACCGGAGCCGACGGCCGCATAGAAATGATATCTAATGCCGAGACGGATAAGAAGAATCCGGCCCCGGACGGATACTTCCTCCGGCTGCTGAAGATGAATGCCCCCGAATGGCCTTACTCAATCATGGGAGCCGTTGGTTCTGTTCTCTCCGGATTCATTGGGCCAACATTTGCAATTGTGATGAGTAACATGATTGAAGTCTTTTACTATAGAAACTATGCATCCATGGAGAAGAAAACCAAGGAGTATGTGTTTATATACATTGGAGCTGGACTCTATGCAGTTGGTGCATATTTGATTCAGCATTACTTTTTCAGTATCATGGGTGAGAACCTCACCACTAGGGTTAGAAGAATGATGCTTGCAGCTATATTGAGGAATGAAGTAGGATGGTTCGATGAGGAGGAACACAACTCAAGCCTGGTGGCAGCAAGGCTTGCAACGGATGCAGCTGATGTCAAGTCTGCCATTGCTGAGAGGATTTCTGTCATTTTACAGAACATGACTTCCCTCCTCACTTCTTTCATTGTTGCTTTCATTGTTGAATGGAGAGTTTCTCTTCTCATTCTTGCTACCTTCCCTCTCCTTGTCCTAGCTAATTTCGCTCAGCAACTTTCCCTAAAAGGTTTTGCTGGAGACACAGCGAAGGCGCATGCAAAAACAAGTATGATTGCTGGAGAAGGAGTGAGCAATATCCGAACCGTTGCAGCATTCAATGCACAGAACAAGATGTTATCGGTCTTCTGCCACGAGCTGCGAGTGCCGCAGATGCGAAGCCTTCGCCGGAGCCAGAGCTCCGGCATCTTGTTCGGCCTCTCGCAGCTCGCGCTTTATGCCTCCGAGGCTCTCATTCTATGGTACGGTGCACATTTGGTCAGCAAAGGAGTTTCAACCTTCTCCAAGGTCATTAAGGTCTTTGTGGTCCTTGTCATAACGGCCAATTCGGTTGCAGAGACCGTTAGCCTCGCCCCGGAGATAATTCGGGGCGGGGAAGCAGTTGGCTCTGTTTTCTCCATCCTCGACCGGCACACCAGGATCGATCCAGATGATCCTGATGCTGATCCGGTCGAGTCAATTCGTGGAGAAATCGAGCTTAGACATGTTGATTTCGCATACCCTTCGAGGCCAGATGTGATGGTTTTCAAGGATCTGAACCTCAGAATTAGGGCAGGCCAAAGCCAAGCCCTCGTCGGAGCGAGTGGATCGGGGAAGAGTTCGGTCATCGCCCTTATCGAGCGGTTCTACGATCCCATAGCCGGGAAAGTCATGGTGGACGGAAAAGACATAAGGAAGCTTAACTTGAAATCCTTGAGGCTCAAGATCGGTTTGGTCCAACAAGAACCGGCATTGTTTGCCGCCTCGATATTTGAAAACATTGCTTATGGAAAGGAGGGAGTGACGGAATCCGAGGTGATCGAGGCAGCTAGAGCTGCCAACGTGCACGCCTTTGTTAGTAGCCTGCCCGAGGGCTACAAAACACCCGTTGGCGAACGGGGCGTGCAGCTCTCGGGTGGGCAGAAACAAAGGATTGCAATTGCTAGGGCTGTCCTTAAGGACCCTACAATATTGCTTCTTGATGAAGCAACAAGTGCACTTGATGCTGAGTCAGAATGTGTGCTACAAGAGGCATTGGAGAGGCTCATGAGGGGGAGGACCACGGTGCTCGTGGCGCACCGGTTGTCCACCATAAGAGGGGTTGATTGCATTGGTGTGGTCCAAGATGGGCGCATTGTGGAACAAGGTAGCCATTCTGAGCTTATAAGCAGGCCTGAGGGTGCATATTCTAGACTCTTGCAACTACAACATCATCACATTTGA 3696 0.4808 MAEGVSEANNTKASPSPLPPEAEKKKEQSLPFFKLFSFADKYDYMLMISGTIGAIVHGSSMPVFFLLFGQMVNGFGKNQMDLNKMTQEVSTYALYFVYLGLVVCISSYAEISCWMYSGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAWRLALLSVAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYNGVFIRNGQTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQKPTIVEDPLEGKCLGEVNGNIEFKDVGFSYPSRPDVMIFRNFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNEGQVLLDNVDIKTLQLKWLRDQIGLVNQEPALFATTILENILYGKPDATMAEVEAAASAANAHSFITLLPNGYNTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTIAVIQQGQVVETGTHEELIAKAGTYASLIRFQEMVGNRDFSNPSTRRTRSSRLSHSLSTKSLSLRSGSLRNLSYQYSTGADGRIEMISNAETDKKNPAPDGYFLRLLKMNAPEWPYSIMGAVGSVLSGFIGPTFAIVMSNMIEVFYYRNYASMEKKTKEYVFIYIGAGLYAVGAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIAERISVILQNMTSLLTSFIVAFIVEWRVSLLILATFPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKMLSVFCHELRVPQMRSLRRSQSSGILFGLSQLALYASEALILWYGAHLVSKGVSTFSKVIKVFVVLVITANSVAETVSLAPEIIRGGEAVGSVFSILDRHTRIDPDDPDADPVESIRGEIELRHVDFAYPSRPDVMVFKDLNLRIRAGQSQALVGASGSGKSSVIALIERFYDPIAGKVMVDGKDIRKLNLKSLRLKIGLVQQEPALFAASIFENIAYGKEGVTESEVIEAARAANVHAFVSSLPEGYKTPVGERGVQLSGGQKQRIAIARAVLKDPTILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSELISRPEGAYSRLLQLQHHHI 1231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02974 1231 CDD ABC_6TM_Pgp_ABCB1_D2_like 656 972 - -
Arst10g02974 1231 CDD ABC_6TM_Pgp_ABCB1_D1_like 47 317 - -
Arst10g02974 1231 FunFam ABC transporter B family member 1 646 955 - -
Arst10g02974 1231 Gene3D ABC transporter type 1, transmembrane domain 273 595 IPR036640 GO:0005524|GO:0016020
Arst10g02974 1231 Pfam ABC transporter 363 511 IPR003439 GO:0005524
Arst10g02974 1231 Gene3D ABC transporter type 1, transmembrane domain 273 595 IPR036640 GO:0005524|GO:0016020
Arst10g02974 1231 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 344 580 IPR003439 GO:0005524
Arst10g02974 1231 FunFam ABC transporter B family member 1 34 270 - -
Arst10g02974 1231 SUPERFAMILY ABC transporter transmembrane region 34 329 IPR036640 GO:0005524|GO:0016020
Arst10g02974 1231 FunFam ABC transporter B family member 19 979 1228 - -
Arst10g02974 1231 PANTHER ABC TRANSPORTER B FAMILY 20 679 IPR039421 -
Arst10g02974 1231 SMART AAA_5 1016 1202 IPR003593 GO:0016887
Arst10g02974 1231 SMART AAA_5 371 557 IPR003593 GO:0016887
Arst10g02974 1231 PANTHER ABC TRANSPORTER B FAMILY 20 679 IPR039421 -
Arst10g02974 1231 CDD ABC_MTABC3_MDL1_MDL2 989 1227 - -
Arst10g02974 1231 ProSitePatterns ABC transporters family signature. 483 497 IPR017871 GO:0005524|GO:0016887
Arst10g02974 1231 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 50 275 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst10g02974 1231 ProSitePatterns ABC transporters family signature. 1128 1142 IPR017871 GO:0005524|GO:0016887
Arst10g02974 1231 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 991 1225 IPR003439 GO:0005524
Arst10g02974 1231 Pfam ABC transporter 1008 1156 IPR003439 GO:0005524
Arst10g02974 1231 CDD ABC_MTABC3_MDL1_MDL2 344 581 - -
Arst10g02974 1231 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 979 1227 IPR027417 -
Arst10g02974 1231 FunFam ABC transporter B family member 19 956 978 - -
Arst10g02974 1231 SUPERFAMILY ABC transporter transmembrane region 648 968 IPR036640 GO:0005524|GO:0016020
Arst10g02974 1231 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 338 581 IPR027417 -
Arst10g02974 1231 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 667 954 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst10g02974 1231 Gene3D - 334 582 IPR027417 -
Arst10g02974 1231 Gene3D - 334 582 IPR027417 -
Arst10g02974 1231 Gene3D ABC transporter type 1, transmembrane domain 25 271 IPR036640 GO:0005524|GO:0016020
Arst10g02974 1231 Gene3D ABC transporter type 1, transmembrane domain 25 271 IPR036640 GO:0005524|GO:0016020
Arst10g02974 1231 Pfam ABC transporter transmembrane region 667 938 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst10g02974 1231 Pfam ABC transporter transmembrane region 48 291 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst10g02974 1231 Gene3D - 979 1230 IPR027417 -
Arst10g02974 1231 MobiDBLite consensus disorder prediction 1 25 - -
Arst10g02974 1231 Gene3D ABC transporter type 1, transmembrane domain 643 968 IPR036640 GO:0005524|GO:0016020
Arst10g02974 1231 FunFam ABC transporter B family member 19 334 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02974 Arst-Chr10 97588299 97596871 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02974 9 1227 Calmodulin-binding Proteins AT2G36910 52.719 0.0 1318