Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02973 ATGTCTAGCAGAAGGTCAAGGCAACAATCAGGGTCTAATAGAATCTCCGATGACCAAATCATCGAACTTGTTTCAAAGTTGCGCCAACTTGTTCCTGAGATTCGAGATAGGCGCTCTGATAAGGTTTCAGCTTCTAAGGTTCTACAAGAGACATGCAACTATATAAGAAACTTACACAGAGAGGTTGATGATTTAAGCGAACGTTTGTCTCAATTGTTGGCCACAATTGATGCTGATAGTGCTGAAGCTGCCATCATAAGGAGCCTAATTAACCAATAA 279 0.4086 MSSRRSRQQSGSNRISDDQIIELVSKLRQLVPEIRDRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLATIDADSAEAAIIRSLINQ 92
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02973 92 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 20 77 IPR036638 GO:0046983
Arst10g02973 92 PANTHER TRANSCRIPTION FACTOR PRE 1 90 IPR044293 GO:0006355|GO:0040008|GO:0046983
Arst10g02973 92 Coils Coil 55 82 - -
Arst10g02973 92 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 4 58 IPR011598 GO:0046983
Arst10g02973 92 Pfam Helix-loop-helix DNA-binding domain 22 58 IPR011598 GO:0046983
Arst10g02973 92 CDD bHLH_AtPRE_like 9 75 - -
Arst10g02973 92 FunFam Transcription factor ILI6 5 87 - -
Arst10g02973 92 Gene3D - 2 87 IPR036638 GO:0046983
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Arst10g02973 Arst-Chr10 97538969 97541287 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02973 14 90 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G39860 76.923 1.87e-36 117
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst10g02973 HLH 6.9e-05 No_clan
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02973 - - gmx:100794486 154.836
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g02973 10 97538969 97541287 Arst4g03702 4 115941408 115942545 PCT