Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02970 ATGGCCTTCCCTCCTTCTCACTCTTTCATCTTCCATCATGATCATCAACAACCACAACATCACCCTCTCCGTACAACTCCTCCTTCAGCCCCCGACTTCCCCTCTTTCCCGCCTCACCACCTCCACTTTCCAGCAGGAGGAGGTGGTGGTGGTGGTGGAGGCTCTTGGATGAAGCGATCCATGTCGTTTTCAGGCATAGACACCACCAAGAACTGTGGCGGCGGCGCCGGCCCTGACGAGTTAGCGCTACTGCACGGAGACGATGAGCTCTCCGACGACGGATCCCAAATCGGGGAGAAGAAGAAGAGGCTCGGCATGGAGCAGGTGAAGGCTCTGGAGAAAAGCTTCGAGGCCGGCAACAAGCTCGACCCCGAGCGCAAAATGCAGCTGGCCAAAGCCCTTGGGCTTCAGCCGCGCCAGATCGCCATTTGGTTCCAGAACCGCCGTGCAAGGTGGAAGACCAAGCAGCTCGAGAAGGAGTATGAGGTCCTCAAGAAGCAGTTTGATGCCGTTAAGGCCGATAACGACTCCCTCAAAACGCAGAACCAGAAGCTCCACGCTGAGCTAGAAGCTCTAAAGGGTAGTAGGGAATGGTGTGAAAATGGAACAATGATTACTCTAAAGAAAGAAAATGAGGGTTCTTGGAGCAACAATGGAAGTGATAATAGCTCAGATATGAACTTGGATCTTTCAAGAACACCAGTGATGAATAGTCCAGTGTCTTCTTCTCATAATAATAATAATAATAACAATAATAATAATAATAATAATAATAATAATAATAATAAAAGCCTTGTTCTACCAAATAATTCTCTTAAGCCAGCAAGCATAACACAGCTTCTTCAATGTTCATCTTCTTCAAGATCAGATCTTCAAGATGAAGGCTTTTGCAACATGTTCCACAACATTGATGAGCAGCACCAGAATTTTTGGCCATGGCCTACTACCGAGAATCACCACCATTTTCATTGA 972 0.4753 MAFPPSHSFIFHHDHQQPQHHPLRTTPPSAPDFPSFPPHHLHFPAGGGGGGGGGSWMKRSMSFSGIDTTKNCGGGAGPDELALLHGDDELSDDGSQIGEKKKRLGMEQVKALEKSFEAGNKLDPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLEKEYEVLKKQFDAVKADNDSLKTQNQKLHAELEALKGSREWCENGTMITLKKENEGSWSNNGSDNSSDMNLDLSRTPVMNSPVSSSHNNNNNNNNNNNNNNNNNNKSLVLPNNSLKPASITQLLQCSSSSRSDLQDEGFCNMFHNIDEQHQNFWPWPTTENHHHFH 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02970 323 CDD homeodomain 100 156 IPR001356 GO:0003677
Arst10g02970 323 ProSitePatterns 'Homeobox' domain signature. 130 153 IPR017970 GO:0000981|GO:0006355
Arst10g02970 323 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 89 313 IPR045224 GO:0003700
Arst10g02970 323 MobiDBLite consensus disorder prediction 1 29 - -
Arst10g02970 323 SMART HOX_1 98 159 IPR001356 GO:0003677
Arst10g02970 323 MobiDBLite consensus disorder prediction 210 269 - -
Arst10g02970 323 Pfam Homeodomain 101 153 IPR001356 GO:0003677
Arst10g02970 323 ProSiteProfiles 'Homeobox' domain profile. 95 155 IPR001356 GO:0003677
Arst10g02970 323 SUPERFAMILY Homeodomain-like 92 157 IPR009057 -
Arst10g02970 323 FunFam Homeobox-leucine zipper protein ATHB-13 92 159 - -
Arst10g02970 323 Gene3D - 92 166 - -
Arst10g02970 323 PRINTS Lambda-repressor HTH signature 126 135 IPR000047 GO:0003677
Arst10g02970 323 PRINTS Lambda-repressor HTH signature 135 151 IPR000047 GO:0003677
Arst10g02970 323 Pfam Homeobox associated leucine zipper 155 194 IPR003106 GO:0006355|GO:0043565
Arst10g02970 323 Coils Coil 147 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02970 Arst-Chr10 97400493 97403234 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02970 1 314 Homeobox Transcription Factor Family AT5G15150 46.646 6.46e-77 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Arst10g02970 Homeodomain 2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02970 K09338 - gmx:100816097 343.584