Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02969 ATGGCCTTCCCTCCTTCTCACTCTTTCATCTTCCATCATGATCATCAACAACCACAACATCACCCTCTCCGTACAACTCCTCCTTCAGCCCCCGACTTCCCCTCTTTCCCGCCTCACCACCTCCACTTTCCAGGAGGAGGTGGTGGTGGTGGTGGAGGCTCTTGGATGAAGCGATCCATGTCGTTTTCAGGCATAGACACCACCAAGAACTGTGGCGGCGGCGCCGGCCCTGACGAGTTAGCGCTACTGCACGGAGACGATGAGCTCTCCGACGACGGATCCCAAATCGGGGAGAAGAAGAAGAGGCTCGGCATGGAGCAGGTGAAGGCTCTGGAGAAAAGCTTCGAGGCCGGCAACAAGCTCGACCCCGAGCGCAAAATGCAGCTGGCCAAAGCCCTTGGGCTTCAGCCGCGCCAGATCGCCATTTGGTTCCAGAACCGCCGTGCAAGGTGGAAGACCAAGCAGCTCGAGAAGGAGTATGAGGTCCTCAAGAAGCAGTTTGATGCCGTTAAGGCCGATAACGACTCCCTCAAAACGCAGAACCAGAAGCTCCACGCTGAGCTAGAAGCTCTAAAGGGTAGTAGGGAATGGTGTGAAAATGGAACAATGATTACTCTAAAGAAAGAAAATGAGGGTTCTTGGAGCAACAATGGAAGTGATAATAGCTCAGATATGAACTTGGATCTTTCAAGAACACCAGTGATGAATAGTCCAGTGTCTTCTTCTCATAATAATAATAATAATAACAATAATAATAATAATAATAATAATAATAATAATAATAAAAGCCTTGTTCTACCAAATAATTCTCTTAAGCCAGCAAGCATAACACAGCTTCTTCAATGTTCATCTTCTTCAAGATCAGATCTTCAAGATGAAGGCTTTTGCAACATGTTCCACAACATTGATGAGCAGCACCAGAATTTTTGGCCATGGCCTACTACCGAGAATCACCACCATTTTCATTGA 969 0.4747 MAFPPSHSFIFHHDHQQPQHHPLRTTPPSAPDFPSFPPHHLHFPGGGGGGGGGSWMKRSMSFSGIDTTKNCGGGAGPDELALLHGDDELSDDGSQIGEKKKRLGMEQVKALEKSFEAGNKLDPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLEKEYEVLKKQFDAVKADNDSLKTQNQKLHAELEALKGSREWCENGTMITLKKENEGSWSNNGSDNSSDMNLDLSRTPVMNSPVSSSHNNNNNNNNNNNNNNNNNNKSLVLPNNSLKPASITQLLQCSSSSRSDLQDEGFCNMFHNIDEQHQNFWPWPTTENHHHFH 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02969 322 PRINTS Lambda-repressor HTH signature 134 150 IPR000047 GO:0003677
Arst10g02969 322 PRINTS Lambda-repressor HTH signature 125 134 IPR000047 GO:0003677
Arst10g02969 322 FunFam Homeobox-leucine zipper protein ATHB-13 91 158 - -
Arst10g02969 322 Pfam Homeodomain 100 152 IPR001356 GO:0003677
Arst10g02969 322 SUPERFAMILY Homeodomain-like 91 156 IPR009057 -
Arst10g02969 322 Coils Coil 146 194 - -
Arst10g02969 322 SMART HOX_1 97 158 IPR001356 GO:0003677
Arst10g02969 322 MobiDBLite consensus disorder prediction 1 29 - -
Arst10g02969 322 CDD homeodomain 99 155 IPR001356 GO:0003677
Arst10g02969 322 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 88 312 IPR045224 GO:0003700
Arst10g02969 322 ProSiteProfiles 'Homeobox' domain profile. 94 154 IPR001356 GO:0003677
Arst10g02969 322 ProSitePatterns 'Homeobox' domain signature. 129 152 IPR017970 GO:0000981|GO:0006355
Arst10g02969 322 Gene3D - 91 165 - -
Arst10g02969 322 MobiDBLite consensus disorder prediction 209 268 - -
Arst10g02969 322 Pfam Homeobox associated leucine zipper 154 193 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02969 Arst-Chr10 97400493 97403234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02969 1 313 Homeobox Transcription Factor Family AT5G15150 46.789 4.62e-77 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Arst10g02969 Homeodomain 2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02969 K09338 - gmx:100816097 325.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g02969 10 97400493 97403234 Arst4g03698 4 115874158 115877260 PCT