Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02962 ATGGCGGCTTGCTTGACCTTCACGGTGTCGCAAGATGGAAGCGGCGACTTCCAAACGGTGCAGGACGCCATCGACGCCGTCCCTCTCAGCAACACTCGCCGGACCGTCATTCGCGTGTCGCCGGGAATCTACCTTCAGCCGCTTTATGTCCCTAAGACAAAGAATTTCATCACTCTTGCTGGCCTCACTCCCGAGGATACTCTTCTTACCTGGAACAACACTGCTTCCAAAATCGATCACCATCAACCTGCTAGGGTGATAGGGACAGGGACATTTGGTTGTGGAACTGCAATTGTAGAAGGGGAGGACTTCATTGCTGAGAATATTACTTTTGAGAATTCTTCCCCTCAGGGTTCAGGGCAAGCAGTGGCAATTAGGGTAACAGCAGATCGATGCGCCTTCTACAATTGCAGGTTCCTTGGATGGCAGGTAGCTCCATGTCTTGATGCATTTTTTTGTATAGCAGATTGGTTGGTCTTATCATCGGTTCATGCATTCATTGCATTCATGAAATTGGTGCAGGACACACTGTACTTACACTATGGAAAACAATATTTGAAAGATTGCTATATTGAAGGTAGTGTCGACTTTATCTTTGGCAATAGCACTGCTCTCTTGGAACACTGTCATATTCACTGCAAGTCTGAAGGGTTCATTACAGCACAGAGCCGAAAGTCTTCACAGGAAACAACTGGCTATGTATTCTTGAGATGTGTTATCACAGGTAATGGAGAAAAATCGTATGCATATCTTGGACGGCCGTGGGGCCCTTTTGGAAGGGTGGTCTTTGCATACACTTACATGGATCATTGTATAAAGCATGTTGGTTGGGATAACTGGGGAAAAGTTGAGAACGAGAGAAGTGCTTGCTTTTATGAATACAGGTGTTTTGGACCTGGTTGCAGTCAATCGAGACGAGTAACATGGTGTAGAGAATTGTTGGATGAAGAAGCAGAGCAGTTCCTCATGCATCCTTTCATAGACCCGGATCCCGAAAGGCCTTGGCTTGCTCAAAGAATGGCCTTGAAGGTTCCATATACAGCATAG 1047 0.4632 MAACLTFTVSQDGSGDFQTVQDAIDAVPLSNTRRTVIRVSPGIYLQPLYVPKTKNFITLAGLTPEDTLLTWNNTASKIDHHQPARVIGTGTFGCGTAIVEGEDFIAENITFENSSPQGSGQAVAIRVTADRCAFYNCRFLGWQVAPCLDAFFCIADWLVLSSVHAFIAFMKLVQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSEGFITAQSRKSSQETTGYVFLRCVITGNGEKSYAYLGRPWGPFGRVVFAYTYMDHCIKHVGWDNWGKVENERSACFYEYRCFGPGCSQSRRVTWCRELLDEEAEQFLMHPFIDPDPERPWLAQRMALKVPYTA 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02962 348 ProSitePatterns Pectinesterase signature 2. 191 200 IPR033131 -
Arst10g02962 348 Pfam Pectinesterase 8 143 IPR000070 GO:0030599|GO:0042545
Arst10g02962 348 Pfam Pectinesterase 170 328 IPR000070 GO:0030599|GO:0042545
Arst10g02962 348 SUPERFAMILY Pectin lyase-like 3 334 IPR011050 -
Arst10g02962 348 Gene3D - 4 153 IPR012334 -
Arst10g02962 348 Gene3D - 168 344 IPR012334 -
Arst10g02962 348 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 5 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02962 Arst-Chr10 97289630 97293843 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02962 8 341 Carbohydrate Esterase AT5G47500 35.174 1.30e-64 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02962 K01051 - gmx:100795636 595.89