Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02961 ATGGCGGCTTGCTTGACCTTCACGGTGTCGCAAGATGGAAGCGGCGACTTCCAAACGGTGCAGGACGCCATCGACGCCGTCCCTCTCAGCAACACTCGCCGGACCGTCATTCGCGTGTCGCCGGGAATCTACCTTCAGCCGCTTTATGTCCCTAAGACAAAGAATTTCATCACTCTTGCTGGCCTCACTCCCGAGGATACTCTTCTTACCTGGAACAACACTGCTTCCAAAATCGATCACCATCAACCTGCTAGGGTGATAGGGACAGGGACATTTGGTTGTGGAACTGCAATTGTAGAAGGGGAGGACTTCATTGCTGAGAATATTACTTTTGAGAATTCTTCCCCTCAGGGTTCAGGGCAAGCAGTGGCAATTAGGGTAACAGCAGATCGATGCGCCTTCTACAATTGCAGGTTCCTTGGATGGCAGGTAGCTCCATGTCTTGATGCATTTTTTTGTATAGATTGGTTGGTCTTATCATCGGTTCATGCATTCATTGCATTCATGAAATTGGTGCAGGACACACTGTACTTACACTATGGAAAACAATATTTGAAAGATTGCTATATTGAAGGTAGTGTCGACTTTATCTTTGGCAATAGCACTGCTCTCTTGGAACACTGTCATATTCACTGCAAGTCTGAAGGGTTCATTACAGCACAGAGCCGAAAGTCTTCACAGGAAACAACTGGCTATGTATTCTTGAGATGTGTTATCACAGGTAATGGAGAAAAATCGTATGCATATCTTGGACGGCCGTGGGGCCCTTTTGGAAGGGTGGTCTTTGCATACACTTACATGGATCATTGTATAAAGCATGTTGGTTGGGATAACTGGGGAAAAGTTGAGAACGAGAGAAGTGCTTGCTTTTATGAATACAGGTGTTTTGGACCTGGTTGCAGTCAATCGAGACGAGTAACATGGTGTAGAGAATTGTTGGATGAAGAAGCAGAGCAGTTCCTCATGCATCCTTTCATAGACCCGGATCCCGAAAGGCCTTGGCTTGCTCAAAGAATGGCCTTGAAGGTTCCATATACAGCATAG 1044 0.4626 MAACLTFTVSQDGSGDFQTVQDAIDAVPLSNTRRTVIRVSPGIYLQPLYVPKTKNFITLAGLTPEDTLLTWNNTASKIDHHQPARVIGTGTFGCGTAIVEGEDFIAENITFENSSPQGSGQAVAIRVTADRCAFYNCRFLGWQVAPCLDAFFCIDWLVLSSVHAFIAFMKLVQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSEGFITAQSRKSSQETTGYVFLRCVITGNGEKSYAYLGRPWGPFGRVVFAYTYMDHCIKHVGWDNWGKVENERSACFYEYRCFGPGCSQSRRVTWCRELLDEEAEQFLMHPFIDPDPERPWLAQRMALKVPYTA 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02961 347 Pfam Pectinesterase 169 327 IPR000070 GO:0030599|GO:0042545
Arst10g02961 347 Pfam Pectinesterase 8 143 IPR000070 GO:0030599|GO:0042545
Arst10g02961 347 Gene3D - 166 343 IPR012334 -
Arst10g02961 347 SUPERFAMILY Pectin lyase-like 3 333 IPR011050 -
Arst10g02961 347 ProSitePatterns Pectinesterase signature 2. 190 199 IPR033131 -
Arst10g02961 347 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 5 330 - -
Arst10g02961 347 Gene3D - 4 152 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02961 Arst-Chr10 97289630 97293843 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02961 8 340 Carbohydrate Esterase AT5G47500 35.277 8.68e-65 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02961 K01051 - gmx:100795636 596.275