Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02960 ATGGCGGCTTGCTTGACCTTCACGGTGTCGCAAGATGGAAGCGGCGACTTCCAAACGGTGCAGGACGCCATCGACGCCGTCCCTCTCAGCAACACTCGCCGGACCGTCATTCGCGTGTCGCCGGGAATCTACCTTCAGCCGCTTTATGTCCCTAAGACAAAGAATTTCATCACTCTTGCTGGCCTCACTCCCGAGGATACTCTTCTTACCTGGAACAACACTGCTTCCAAAATCGATCACCATCAACCTGCTAGGGTGATAGGGACAGGGACATTTGGTTGTGGAACTGCAATTGTAGAAGGGGAGGACTTCATTGCTGAGAATATTACTTTTGAGAATTCTTCCCCTCAGGGTTCAGGGCAAGCAGTGGCAATTAGGGTAACAGCAGATCGATGCGCCTTCTACAATTGCAGGTTCCTTGGATGGCAGGACACACTGTACTTACACTATGGAAAACAATATTTGAAAGATTGCTATATTGAAGGTAGTGTCGACTTTATCTTTGGCAATAGCACTGCTCTCTTGGAACACTGTCATATTCACTGCAAGTCTGAAGGGTTCATTACAGCACAGAGCCGAAAGTCTTCACAGGAAACAACTGGCTATGTATTCTTGAGATGTGTTATCACAGGTAATGGAGAAAAATCGTATGCATATCTTGGACGGCCGTGGGGCCCTTTTGGAAGGGTGGTCTTTGCATACACTTACATGGATCATTGTATAAAGCATGTTGGTTGGGATAACTGGGGAAAAGTTGAGAACGAGAGAAGTGCTTGCTTTTATGAATACAGGTGTTTTGGACCTGGTTGCAGTCAATCGAGACGAGTAACATGGTGTAGAGAATTGTTGGATGAAGAAGCAGAGCAGTTCCTCATGCATCCTTTCATAGACCCGGATCCCGAAAGGCCTTGGCTTGCTCAAAGAATGGCCTTGAAGGTTCCATATACAGCATAG 954 0.4706 MAACLTFTVSQDGSGDFQTVQDAIDAVPLSNTRRTVIRVSPGIYLQPLYVPKTKNFITLAGLTPEDTLLTWNNTASKIDHHQPARVIGTGTFGCGTAIVEGEDFIAENITFENSSPQGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSEGFITAQSRKSSQETTGYVFLRCVITGNGEKSYAYLGRPWGPFGRVVFAYTYMDHCIKHVGWDNWGKVENERSACFYEYRCFGPGCSQSRRVTWCRELLDEEAEQFLMHPFIDPDPERPWLAQRMALKVPYTA 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02960 317 ProSitePatterns Pectinesterase signature 2. 160 169 IPR033131 -
Arst10g02960 317 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 5 300 - -
Arst10g02960 317 FunFam Pectinesterase 3 310 - -
Arst10g02960 317 Pfam Pectinesterase 8 297 IPR000070 GO:0030599|GO:0042545
Arst10g02960 317 SUPERFAMILY Pectin lyase-like 3 303 IPR011050 -
Arst10g02960 317 Gene3D - 4 312 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02960 Arst-Chr10 97289630 97293843 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02960 8 310 Carbohydrate Esterase AT5G47500 38.658 1.96e-70 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02960 K01051 - gmx:100795636 612.068