Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02955 ATGCAAACTATGACAAAAGAAGAGTACTTGGCTACTCTAAGGAGAAAGAGCAGTGGCTTTTCAAGAGGTGTATCAAAGTATAGGGGTGTTGCAAGGCACCACCACAATGGTAGATGGGAAGCACGCTACCTAGGCACCTACAGCACCCAAGAAGAAGCTGCTCGTGCTTATGACATAGCAGCCATCGAGTATAGAGGGATCCATGCTGTAACCAACTTTGATTTGAGTTCTTACATACGGTGGTTAAAGCCTTCAGGGGGTAACATCTCAGAATTAAAACAGGAATCAGAGGTAACACCGAAGTCTCAGACAGTGGTATCTCAAACTCATTCACCAATAGAGGGGTCTAAATCCTTGGCCGTTCATACATTTAGTCCAGATTATCTCGATTTACCTCAAAATCATGAAATCTTTGAAAACAAAACATTCCAATTCTCCAGCAATAAGTCATCTTCTCCAACCGCACTCAGCCTGCTCCTCCGATCATCAATATTTAGAGAATTGGTTGAAAAGAATTTGAACATGTGTGGAGATGAAACTGATGGGGAAGACAAAAAGGATCAACGCCCACAGATAACTAGTGATGATGAGTTGGGTGGGATCTTTTACGATGGAATTAGCAATCTCCCTTATCTGTGA 639 0.4241 MQTMTKEEYLATLRRKSSGFSRGVSKYRGVARHHHNGRWEARYLGTYSTQEEAARAYDIAAIEYRGIHAVTNFDLSSYIRWLKPSGGNISELKQESEVTPKSQTVVSQTHSPIEGSKSLAVHTFSPDYLDLPQNHEIFENKTFQFSSNKSSSPTALSLLLRSSIFRELVEKNLNMCGDETDGEDKKDQRPQITSDDELGGIFYDGISNLPYL 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02955 212 Gene3D AP2/ERF domain 25 76 IPR036955 GO:0003700|GO:0006355
Arst10g02955 212 SMART rav1_2 26 80 IPR001471 GO:0003700|GO:0006355
Arst10g02955 212 Pfam AP2 domain 25 66 IPR001471 GO:0003700|GO:0006355
Arst10g02955 212 ProSiteProfiles AP2/ERF domain profile. 26 74 IPR001471 GO:0003700|GO:0006355
Arst10g02955 212 MobiDBLite consensus disorder prediction 176 197 - -
Arst10g02955 212 CDD AP2 25 76 IPR001471 GO:0003700|GO:0006355
Arst10g02955 212 MobiDBLite consensus disorder prediction 176 193 - -
Arst10g02955 212 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 141 - -
Arst10g02955 212 SUPERFAMILY DNA-binding domain 25 76 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02955 Arst-Chr10 97097722 97099469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02955 1 97 AP2-EREBP Transcription Factor Family AT3G54320 64.167 4.42e-36 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Arst10g02955 AP2 4.5e-06 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02955 - - adu:107471058 428.713