Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02916 ATGGGAAGACCTCCTTGCTGTGACAAAACCAATGTGAAGAGGGGTCTTTGGACTCCTGAGGAAGATGCTAAGATACTTGCTTATGTCTCCAACCATGGAATTGGAAACTGGACCTTGGTTCCTAAGAAAGCAGGACTGAACCGATGCGGAAAGAGCTGCCGGCTAAGATGGACTAACTACCTCAGACCGGATCTCAAGCATGACAATTTCACTCCCCAAGAAGAAGAGCTCATTATTAACCTTCATGCAGCTATTGGAAGCAGATGGTCCTTAATTGCGAAACGGCTTCCCGGGAGAACAGACAATGATGTGAAGAATTACTGGAACACAAAGCTGAGGAAAAAGCTTATGAACATGGGAATCGATCCGGTAACTCATAAGCCGGTGTCACAAGTCCTTTCTGACTTGGGAAGCATCAATGGCCTCCCAAGCACAGGAAACCAAATTGAACCATCCAACCCAATGGTGGAGCAGACACAAGAGGAACAAACTCAATTTTGGGAAAATCAGGTGCAATACCAACAAGTCTTGGCCTCAGAATGTGTCCAACCAAATGTAGTCTTCAGCGAAGCTGCTTCGTCGAGTTCTTCGTCATCATCCTCCAATCTCACTCAATTGAGCTCCCCTCAGCAGTCATATAACTGTCACAATTCTCAAATAACTCCTCCTTGTTCCTCGTCGTTCGATTGGAGTGACTTTCTTCATGGTGACTCAATCATGTGGTCAGAGATGCAGCAGTGTGATCCACAGAGGGTTATGTCATCCAGTGAGGCATTCGGCGCTGTTGCTTGCGGCGCAAGCATGTGTGAAGGCCGTTCAAATTCAGGGGATTCATTTGTGGATGGTATTTTGGACAGGGACAGTGAAATAAGAGCAGCATTCCCTGAACTTTTGGATGATGCTTTTGATTATTGA 915 0.4612 MGRPPCCDKTNVKRGLWTPEEDAKILAYVSNHGIGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLKHDNFTPQEEELIINLHAAIGSRWSLIAKRLPGRTDNDVKNYWNTKLRKKLMNMGIDPVTHKPVSQVLSDLGSINGLPSTGNQIEPSNPMVEQTQEEQTQFWENQVQYQQVLASECVQPNVVFSEAASSSSSSSSSNLTQLSSPQQSYNCHNSQITPPCSSSFDWSDFLHGDSIMWSEMQQCDPQRVMSSSEAFGAVACGASMCEGRSNSGDSFVDGILDRDSEIRAAFPELLDDAFDY 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02916 304 Gene3D - 68 131 - -
Arst10g02916 304 CDD SANT 69 112 IPR001005 -
Arst10g02916 304 Pfam Myb-like DNA-binding domain 69 110 IPR001005 -
Arst10g02916 304 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Arst10g02916 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Arst10g02916 304 PANTHER F14D16.11-RELATED 1 304 - -
Arst10g02916 304 CDD SANT 17 61 IPR001005 -
Arst10g02916 304 MobiDBLite consensus disorder prediction 193 214 - -
Arst10g02916 304 FunFam Transcription factor RAX3 7 67 - -
Arst10g02916 304 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Arst10g02916 304 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Arst10g02916 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Arst10g02916 304 FunFam transcription factor MYB80 69 129 - -
Arst10g02916 304 Gene3D - 7 67 - -
Arst10g02916 304 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Arst10g02916 304 SMART sant 66 114 IPR001005 -
Arst10g02916 304 SMART sant 13 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02916 Arst-Chr10 96465851 96467365 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02916 1 304 MYB Transcription Factor Family AT3G28470 49.852 1.66e-90 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst10g02916 Myb_DNA-binding 6.1e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02916 K09422 - gmx:100815077 414.846