Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02886 ATGGATCCACCACTTTGTGCCAATGGTTGCGGCTTCTATGGTTCTGCTGCCAACAACAATCTTTGCTCAAAGTGTTACAAAGATCACATCAAACAAACCTTCATCATCATGGAATCACAAAATGATACCAAATCTCATCATGACCAACAATTAACTGATGTGTTTGAAAGATTTACCAAAGACTTTGGTGCAACCATTGATGATATTTCTACCAACAACAACAACAATGAAACGAAGAAAAGGTGCAAGAAGTGCAATAAAAAAGTTGGATTAACAGGGTTTGAGTGTCGATGTGGAGATTTGTTTTGTGGAAAGCATAGGTATCCAGAAGTTCATGAATGTGAATTCAATTTTAAGGATATTGGTCGCAACATTTTGGCAAAACAGAACCCTCTTTGCATTCGTGATAAGTTAGATAAAAGAATTTAG 429 0.3636 MDPPLCANGCGFYGSAANNNLCSKCYKDHIKQTFIIMESQNDTKSHHDQQLTDVFERFTKDFGATIDDISTNNNNNETKKRCKKCNKKVGLTGFECRCGDLFCGKHRYPEVHECEFNFKDIGRNILAKQNPLCIRDKLDKRI 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02886 142 SUPERFAMILY AN1-like Zinc finger 72 134 IPR035896 -
Arst10g02886 142 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 33 - -
Arst10g02886 142 PANTHER AN1-TYPE ZINC FINGER PROTEIN 2 140 - -
Arst10g02886 142 SMART A20_3 3 27 IPR002653 GO:0003677|GO:0008270
Arst10g02886 142 ProSiteProfiles Zinc finger A20-type profile. 1 34 IPR002653 GO:0003677|GO:0008270
Arst10g02886 142 FunFam Zinc finger AN1-type containing 6 58 137 - -
Arst10g02886 142 Pfam AN1-like Zinc finger 82 117 IPR000058 GO:0008270
Arst10g02886 142 ProSiteProfiles Zinc finger AN1-type profile. 76 122 IPR000058 GO:0008270
Arst10g02886 142 SMART AN1_Zf_4 82 119 IPR000058 GO:0008270
Arst10g02886 142 Pfam A20-like zinc finger 5 27 IPR002653 GO:0003677|GO:0008270
Arst10g02886 142 Gene3D - 1 52 - -
Arst10g02886 142 Gene3D - 64 135 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02886 Arst-Chr10 95876598 95877098 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02886 5 140 C2H2 Transcription Factor Family AT3G52800 37.419 1.24e-28 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02886 - - aip:107621478 172.17