Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02877 ATGGCTTTTTCTTCTCTGCACATCTGCATGGACTCACCAGATCACTGGTTCCAGGGAACAGTTCACGACGAGGTCTCCGGCGGCAGCGGCAGCGGTGGCATGGATTCTTCTGGCTCGCCATTATCCTCCTCCGGCGACATTATGAAATGCTCGGCAAGGCCAATGATGGAGAGAAGAATGAGACCCCCACACGACCAAGCCCTCAAGTGCCCCCGCTGCGATTCAACCCACACCAAATTCTGTTACTACAACAACTACAGCCTCTCTCAGCCCCGCTATTTCTGCAAGACCTGCAGAAGGTACTGGACTAAGGGCGGCACCCTCCGCAACATCCCCGTCGGCGGTGGCTGCCGGAAAAACAAGAAACTCTCCTCCAATTCCAAGAAACACCACCAATCCAACAACAACAATAACAATGACAACCAATCACATTCTTATTCTACTTGCCCTAAAGATCTTCAGCTTTCTTTCCCCGATGTCCAATTTTCTCACCTCAGTAACATTATTCTTGGTGGTAACGTTAACCCTAATCATAGTAGCTTCATGGAGAGCAAGTTCCACGTTGGCATGCTTGAGAACAATCTTGTTAGGCCAATCGATTTCATGGAGAGCAAGCTTGAAGGCATAATTGGGAGCGGTATTAATAGTTCTAGAAGCTTTGATTTCTTTGGGAATAATAATAGTAATGGCGGCGGCAACGACAACAGCAATAACAACATCAACATGATGATGCTTGGTATGGCTAATAATGTTGGCTTGGGACCTAACAATTTTCATGCACTTAATTGCTCTCCAATTGCATCATTTGGCGGCATGTCATCACTTAATGGTGGCGGTTGCGGCAACAACAGTGTCAACAACGTTGGTAATAGTTATATTATGGATTCTTCATCTTCATGCCATGAGAGAATGATGCTGACATATGATGATGATAATAATAATGCCACGATTGATGTAAAGCCAAACCCTAAGCTTCTTTCCCTTGAATGGCAGGATCATGGTTGTTCTGATGCAGGAAAAGACTCATTTGGGTACCTCCATAGTCATGGATCATGGTCTGGCATGATCAACGGCTATGGTTCCTCCACAACAAACCCTTTGGTTTAA 1107 0.458 MAFSSLHICMDSPDHWFQGTVHDEVSGGSGSGGMDSSGSPLSSSGDIMKCSARPMMERRMRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKLSSNSKKHHQSNNNNNNDNQSHSYSTCPKDLQLSFPDVQFSHLSNIILGGNVNPNHSSFMESKFHVGMLENNLVRPIDFMESKLEGIIGSGINSSRSFDFFGNNNSNGGGNDNSNNNINMMMLGMANNVGLGPNNFHALNCSPIASFGGMSSLNGGGCGNNSVNNVGNSYIMDSSSSCHERMMLTYDDDNNNATIDVKPNPKLLSLEWQDHGCSDAGKDSFGYLHSHGSWSGMINGYGSSTTNPLV 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02877 368 ProSiteProfiles Zinc finger Dof-type profile. 68 122 IPR003851 GO:0003677|GO:0006355
Arst10g02877 368 ProSitePatterns Zinc finger Dof-type signature. 70 106 IPR003851 GO:0003677|GO:0006355
Arst10g02877 368 MobiDBLite consensus disorder prediction 129 147 - -
Arst10g02877 368 MobiDBLite consensus disorder prediction 113 147 - -
Arst10g02877 368 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 56 211 IPR045174 GO:0003700|GO:0006355
Arst10g02877 368 MobiDBLite consensus disorder prediction 30 46 - -
Arst10g02877 368 Pfam Dof domain, zinc finger 65 122 IPR003851 GO:0003677|GO:0006355
Arst10g02877 368 MobiDBLite consensus disorder prediction 26 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02877 Arst-Chr10 95615101 95617277 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02877 1 229 C2C2-Dof Transcription Factor Family AT5G62940 44.355 8.77e-48 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Arst10g02877 zf-Dof 1.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02877 - - ahf:112784757 589.341