Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02876 ATGGCTTTTTCTTCTCTGCACATCTGCATGGACTCACCAGATCACTGGTTCCAGGGAACAGTTCACGACGAGGTCTCCGGCGGCAGCGGCAGCGGTGGCATGGATTCTTCTGGCTCGCCATTATCCTCCTCCGGCGACATTATGAAATGCTCGGCAAGGCCAATGATGGAGAGAAGAATGAGACCCCCACACGACCAAGCCCTCAAGTGCCCCCGCTGCGATTCAACCCACACCAAATTCTGTTACTACAACAACTACAGCCTCTCTCAGCCCCGCTATTTCTGCAAGACCTGCAGAAGGTACTGGACTAAGGGCGGCACCCTCCGCAACATCCCCGTCGGCGGTGGCTGCCGGAAAAACAAGAAACTCTCCTCCAATTCCAAGAAACACCACCAATCCAACAACAACAATAACAATGACAACCAATCACATTCTTATTCTACTTGCCCTAAAGATCTTCAGCTTTCTTTCCCCGATGTCCAATTTTCTCACCTCAGTAACATTATTCTTGGTGGTAACGTTAACCCTAATCATAGTAGCTTCATGGAGAGCAAGTTCCACGTTGGCATGCTTGAGAACAATCTTGTTAGGCCAATCGATTTCATGGAGAGCAAGCTTGAAGGCATAATTGGGAGCGGTATTAATAGTTCTAGAAGCTTTGATTTCTTTGGGAATAATAATAGTAATGGCGGCGGCAACGACAACAGCAATAACAACATCAACATGATGATGCTTGGTATGGCTAATAATGTTGGCTTGGGACCTAACAATTTTCATGCACTTAATTGCTCTCCAATTGCATCATTTGGCGGCATGTCATCACTTAATGGTGGCGGTTGCGGCAACAACAGTGTCAACAACGTTGGATCATGGTTGTTCTGA 882 0.4728 MAFSSLHICMDSPDHWFQGTVHDEVSGGSGSGGMDSSGSPLSSSGDIMKCSARPMMERRMRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKLSSNSKKHHQSNNNNNNDNQSHSYSTCPKDLQLSFPDVQFSHLSNIILGGNVNPNHSSFMESKFHVGMLENNLVRPIDFMESKLEGIIGSGINSSRSFDFFGNNNSNGGGNDNSNNNINMMMLGMANNVGLGPNNFHALNCSPIASFGGMSSLNGGGCGNNSVNNVGSWLF 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02876 293 ProSiteProfiles Zinc finger Dof-type profile. 68 122 IPR003851 GO:0003677|GO:0006355
Arst10g02876 293 Pfam Dof domain, zinc finger 65 122 IPR003851 GO:0003677|GO:0006355
Arst10g02876 293 ProSitePatterns Zinc finger Dof-type signature. 70 106 IPR003851 GO:0003677|GO:0006355
Arst10g02876 293 MobiDBLite consensus disorder prediction 129 147 - -
Arst10g02876 293 MobiDBLite consensus disorder prediction 113 147 - -
Arst10g02876 293 MobiDBLite consensus disorder prediction 30 46 - -
Arst10g02876 293 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 56 215 IPR045174 GO:0003700|GO:0006355
Arst10g02876 293 MobiDBLite consensus disorder prediction 26 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02876 Arst-Chr10 95615101 95617277 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02876 1 229 C2C2-Dof Transcription Factor Family AT5G62940 44.355 1.56e-48 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Arst10g02876 zf-Dof 1.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02876 - - aip:107624177 431.409