Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02834 ATGGCCATGGCTGCTCTCCGTCGTGAAGGGAGGCGATTCGCCACTCCACTCCTCTCTTCTCCTATCCGCTCCTCTCTCATCTCTCACTCTCAAGAACAAGCTCCCAATGGAGTGCGCTCTATTTCGACTCAAGTTGTGAGAAACAGGATGAAGAGTGTTAAGAATATCCAGAAGATCACAAAGGCAATGAAGATGGTTGCAGCCTCTAAGCTTAGAGCTATTCAAACCAGAGCTGAAAACTCCCGTGGCCTCTGGCAACCATTCACTGCCCTTCTGGGTGACTCTCCCAGTGTTAATGTCAAGAAGAGTGTTATTGTTACCGTTTCTTCAGACAAAGGTCTTTGTGGTGGTATCAATTCCACATCTGTCAAGATAAGCAGGATTTTGCACAAATTGAGCTCTGGGCCTGAGAAAGAGACAAAGTATGTCATATTGGGTGAGAAGGCTAAGGCTCAATTGATACGTGATTCCAAGGATGACATTAGTCTCAGCATAACTGAGCTGCAGAAGAATCCCCTGAACTATTCTCAGGTTTCAGTCTTGGCAGATGACATCCTAAAGAATGTGGAGTTTGATGCCTTAAGGATTGTGTTCAACAAGTTCCATTCAGTTGTCCAATTTATGCCAACTGTGTCAACTGTGCTCTCTCCTGAGATTGTGGAGAGAGAGGCTGAAGCTGGGGGAAAGCTTGGGGAGCTAGACTCTTATGAAATTGAAGGTGCCGAGACAAAAGGAGAAGTTCTTCAGAATCTGGCTGAGTTCCAGTTTTCTTGTATATTGTTCAATGGGGTGTTGGAGAATGCTTGCAGTGAACAAGGAGCAAGAATGTCTGCCATGGACAGCTCTAGCAGGAACGCTGGAGATATGCTTGACCGACTCACTCTCACCTACAACAGAACTCGTCAAGCATCAATCACCACTGAATTGATTGAGATTATATCTGGAGCTTCAGCACTGGAAGGTTAA 966 0.4565 MAMAALRREGRRFATPLLSSPIRSSLISHSQEQAPNGVRSISTQVVRNRMKSVKNIQKITKAMKMVAASKLRAIQTRAENSRGLWQPFTALLGDSPSVNVKKSVIVTVSSDKGLCGGINSTSVKISRILHKLSSGPEKETKYVILGEKAKAQLIRDSKDDISLSITELQKNPLNYSQVSVLADDILKNVEFDALRIVFNKFHSVVQFMPTVSTVLSPEIVEREAEAGGKLGELDSYEIEGAETKGEVLQNLAEFQFSCILFNGVLENACSEQGARMSAMDSSSRNAGDMLDRLTLTYNRTRQASITTELIEIISGASALEG 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02834 321 Gene3D ATP synthase, gamma subunit, helix hairpin domain 46 316 - -
Arst10g02834 321 PIRSF ATP_synthase_gamma 10 319 - -
Arst10g02834 321 ProSitePatterns ATP synthase gamma subunit signature. 305 318 IPR023632 -
Arst10g02834 321 Gene3D - 66 278 - -
Arst10g02834 321 CDD F1-ATPase_gamma 42 316 IPR000131 GO:0015986|GO:0045261|GO:0046933
Arst10g02834 321 NCBIfam ATP synthase F1 subunit gamma 42 319 IPR000131 GO:0015986|GO:0045261|GO:0046933
Arst10g02834 321 PRINTS ATP synthase gamma subunit signature 297 318 IPR000131 GO:0015986|GO:0045261|GO:0046933
Arst10g02834 321 PRINTS ATP synthase gamma subunit signature 192 209 IPR000131 GO:0015986|GO:0045261|GO:0046933
Arst10g02834 321 PRINTS ATP synthase gamma subunit signature 100 119 IPR000131 GO:0015986|GO:0045261|GO:0046933
Arst10g02834 321 PRINTS ATP synthase gamma subunit signature 266 285 IPR000131 GO:0015986|GO:0045261|GO:0046933
Arst10g02834 321 FunFam ATP synthase gamma chain 274 316 - -
Arst10g02834 321 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 43 319 IPR035968 GO:0015986|GO:0045261|GO:0046933
Arst10g02834 321 PANTHER ATP SYNTHASE GAMMA CHAIN 23 319 IPR000131 GO:0015986|GO:0045261|GO:0046933
Arst10g02834 321 FunFam ATP synthase subunit gamma 66 278 - -
Arst10g02834 321 Pfam ATP synthase 44 319 IPR000131 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02834 Arst-Chr10 94913793 94917777 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02834 46 319 Primary Pumps ATPases AT1G15700 29.846 7.26e-28 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02834 K02136 - rcu:8286653 543.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g02834 10 94913793 94917777 Arst8g03482 8 45588711 45590052 ECH
Arst10g02834 10 94913793 94917777 Arst10g02834 10 94913793 94917777 ECH
Arst1g03887 1 100136610 100138238 Arst10g02834 10 94913793 94917777 PCT