Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02803 ATGAGAGCCAAACTTCGTTTCAAATTAAGAACACAAAAACTTTGGTGTATACATCATACATGTATATATATAGAGAGGCCTATAGTACATACCATATTTAATTTGGTGCAGATCTTTGAAGAAGTTGCGCAAATCTGCACCAAGAAAAAATTAATGGAGTCTATGTTGTTGTCGTCAATCACAGCATTACTTCTGTTACTGCTCTCTTGCTTCACATTCACTTCTACAGATGCCTATGATGCACTTGATCCAACCGGTAACATAACGATCAAATGGGACGTCATTAGCTGGACTCCAGATGGCTATGTTGCTGTGGTATCAATGTACAATTTCCAACAGTATCGCCATATTCAGGCGCCGGGGTGGTCGTTAGGGTGGTCGTGGGCCAAGAAAGAAGTAATATGGAACATGATGGGAGGGCAGACCACAGAGCAAGGAGACTGCTCAAAGTTCAAAGCAGGCCAACCACATTGCTGTAAAAAGGATCCTCTAGTCGTTGACTTGCTCCCGGGGACTCCTTACAACCAACAGATCGCCAATTGCTGCAAAGGAGGTGTCCTGAGTTCCTGGGCTCAGGACCCCACCAATGCTGTTAGCTCATTCCAGGTCAGCGTTGGTTCGGCTGGAACAACTAACAGAACGGTCAAGTTGCCGCGAAACTTTACCCTCAAGGCACCTGGTCCTGGATACACTTGTGGCCCTGCAAAGATTGTTAGGCCAACTAAATTTGTTACTAGTGACAAAAGGAGAACCACCCAAGCCTTAATGACTTGGAATGTTACCTGCACATACTCTCAATTCCTGGCTCAAAAGACACCAACTTGTTGTGTTTCCCTCTCATCCTTCTACAATGACACAATAGTAAACTGTCCAACTTGCACCTGCGGCTGCCGGAACAAAACAGCGCCCGGAAGCTGCGTAGATCCAGACTCTACACATTTAGCTTCAGTTGTATCAGGGAAGCCTACGGATACGCCTCTTGTCCAGTGCTCCAGCCACATGTGTCCGATTCGAGTGCATTGGCATGTGAAGCTAAATTACAAGGAGTACTGGAGGATCAAGATCACAATCACAAATTTCAACTACAGAATGAACTACACACAATGGAACCTTGTCGTGCAGCACCCGAATTTTGATAATCTAACTGAGTACTTCAGCTTTAATTACAAGCCACTCATGCCTTATGAAGGCTTAAATGATACTGCTATGCTATGGGGAGTGAAGTTCTACAATGATTTTCTATCTTCAGCTGGACCCCTTGGTAATGTGCAATCAGAACTCTTGTTTAAAAAGGACAAAGAAACCTTCACTTTTGATAAGGGATGGGCTTTCCCAAGAAGGATCTATTTCAATGGAGATAATTGTGTTATGCCTCCTCCTGATGCATATCCTTGGCTTCCAAATTCAAGTTCAAGACTAGTTTTCTCTTTACTAGGCACTTTCATCATAGCCATTTTAGCTTCTCTATATTTATAG 1476 0.4363 MRAKLRFKLRTQKLWCIHHTCIYIERPIVHTIFNLVQIFEEVAQICTKKKLMESMLLSSITALLLLLLSCFTFTSTDAYDALDPTGNITIKWDVISWTPDGYVAVVSMYNFQQYRHIQAPGWSLGWSWAKKEVIWNMMGGQTTEQGDCSKFKAGQPHCCKKDPLVVDLLPGTPYNQQIANCCKGGVLSSWAQDPTNAVSSFQVSVGSAGTTNRTVKLPRNFTLKAPGPGYTCGPAKIVRPTKFVTSDKRRTTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVNCPTCTCGCRNKTAPGSCVDPDSTHLASVVSGKPTDTPLVQCSSHMCPIRVHWHVKLNYKEYWRIKITITNFNYRMNYTQWNLVVQHPNFDNLTEYFSFNYKPLMPYEGLNDTAMLWGVKFYNDFLSSAGPLGNVQSELLFKKDKETFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNSSSRLVFSLLGTFIIAILASLYL 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02803 491 Pfam COBRA-like protein 102 265 IPR006918 GO:0010215|GO:0016020
Arst10g02803 491 PIRSF COBRA 48 491 IPR006918 GO:0010215|GO:0016020
Arst10g02803 491 PANTHER PROTEIN COBRA 68 477 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02803 Arst-Chr10 94278046 94281055 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02803 64 490 COBRA Gene Family AT3G02210 72.158 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02803 - - gmx:100815779 805.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g02803 10 94278046 94281055 Arst10g02803 10 94278046 94281055 ECH
Arst1g04114 1 103138735 103142321 Arst10g02803 10 94278046 94281055 PCT