Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02798 ATGCACTCTGTCCCCGTCGAGATTCTAAAAGGGAGCAAGATGTCCGAGTTGCCTCACAACTCTTTACACTCATGGACTCTAATAAACCTACTTCTTCTACAGCAGGAGTCGTTGTGGTTGCATCAACTAACAGACAGAGTGGATGCAATTGACCCCGCTCTAAGAAGATCCGGACGTTTTGATGCTGAAATTGAAGTTACTGTCCCAAATGAAGAAGATCGCTTTCAAATTCTTAAGCTGTATACAAAAAAGATTCCATTGGATCCCAGTGTTGACATAAAAATTATTGCTGCATCATGCAATGGATATGTTGGAGCTGATTTGGAGGCATTGTGTCGTGAAGCTACCATGTTTGCAATTAAAAGGTCAAATACAAATGAAGATGCTATTAATTTCAGTTTAACAATGGAAGATTGGCAAAATGCAAGGTCCATTGTTGGTCCAAGTATAACAAGAGGTGTTACTGTTGAAGTTCCCAAAGTGACTTGGGAAGACATTGGGGGATTAAAAGATTTGAAGAAAAAACTTCAGCAAGCTGTCGAATGGCCTATTAAGCATTCTGATGCATTTTCAAGATTGGGAATATCTCCCGTACGTGGAATTCTTCTCCATGGACCTCCAGGATGCTCAAAAACAACCCTTGCTAAAGCTGCTGCTCATGCTGCCCAAGCTTCTTTCTTTTCTTTGAGTGGTGCAGAATTGTATTCAATGTATGTTGGAGAGGGGGAAGCTTTGCTCCGTAACACATTTCAGAGAGCCCGACTCGCGGCACCCAGTATAATATTCTTTGATGAGGCTGATGTTGTAGCTACAAAACGAGGTGATAGTTCAAGCAATAGTGCGACAGTTGGTGAGAGGCTTTTATCCACTTTGTTGACTGAGATTGATGGCTTAGAAGAAGCTAAAGGAATTCTTGTTCTGGCAGCAACAAATCGCCCTTATGCGATTGACGCTGCACTCATGCGTCCAGGACGTTTTGATCTGGTTCTTTATGTGCCACCGCCTGATTTGGAGGCTCGATATGAGATACTTTGTGTCCATACGCGTAATATGAAAACAGCGAGTGACGTCAATCTCAGACGACTAGCAGAAGACACTGAACTCTTTACAGGAGCTGAACTGGAGGGGTTATGCAGGGAAGCTGGAATTGTGGCTCTAAGGGAAGACATATCCGCCACCGTTGTATGTGATCGTCATTTCCAGATAGTGAAAGATTCTGTAAACCCCGCATTAACAAAAGCTGAAATTAATTCATACTCATCTTTTATGAAGACCTCATCTCAAGCTTTTCCTAGACATTTTGATTCAGATATGGAATCAGATAGGAGCAAAAAGAATGGGTTCAATCCTATGTCTTTGGTTAAAATTAGTGTTGCCAGTTTTGTATTACTTGCTGCTGCTAAATACTATAACATAGGTGGAGACCAAATTGGACCTCATACACCAATGACCTGA 1455 0.4186 MHSVPVEILKGSKMSELPHNSLHSWTLINLLLLQQESLWLHQLTDRVDAIDPALRRSGRFDAEIEVTVPNEEDRFQILKLYTKKIPLDPSVDIKIIAASCNGYVGADLEALCREATMFAIKRSNTNEDAINFSLTMEDWQNARSIVGPSITRGVTVEVPKVTWEDIGGLKDLKKKLQQAVEWPIKHSDAFSRLGISPVRGILLHGPPGCSKTTLAKAAAHAAQASFFSLSGAELYSMYVGEGEALLRNTFQRARLAAPSIIFFDEADVVATKRGDSSSNSATVGERLLSTLLTEIDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARYEILCVHTRNMKTASDVNLRRLAEDTELFTGAELEGLCREAGIVALREDISATVVCDRHFQIVKDSVNPALTKAEINSYSSFMKTSSQAFPRHFDSDMESDRSKKNGFNPMSLVKISVASFVLLAAAKYYNIGGDQIGPHTPMT 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02798 484 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 148 IPR027417 -
Arst10g02798 484 Gene3D - 69 150 - -
Arst10g02798 484 Pfam AAA+ lid domain 90 138 IPR041569 -
Arst10g02798 484 Pfam AAA+ lid domain 356 401 IPR041569 -
Arst10g02798 484 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 417 IPR027417 -
Arst10g02798 484 CDD RecA-like_CDC48_r2-like 172 332 - -
Arst10g02798 484 PANTHER AAA-FAMILY ATPASE 42 426 - -
Arst10g02798 484 ProSitePatterns AAA-protein family signature. 304 322 IPR003960 GO:0005524|GO:0016887
Arst10g02798 484 Gene3D - 151 335 IPR027417 -
Arst10g02798 484 FunFam Cell division control protein 48-B-like protein 151 335 - -
Arst10g02798 484 Gene3D - 336 420 - -
Arst10g02798 484 Pfam ATPase family associated with various cellular activities (AAA) 201 333 IPR003959 GO:0005524|GO:0016887
Arst10g02798 484 FunFam spermatogenesis-associated protein 5-like protein 1 335 421 - -
Arst10g02798 484 SMART AAA_5 197 336 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02798 Arst-Chr10 94223135 94228621 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02798 132 441 Calmodulin-binding Proteins AT3G56690 45.833 1.37e-84 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02798 - - adu:107470970 919.072