Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02797 ATGTGTGCCCAATTGCAGACGAGTTTGGTTCGAGCAGTGGTTCGGGAATGTGGGGCGCATTTGAAAATTATTAGTCCGCACATGGTGCACAGAGCACATGCCGGTGAAAGTGAGAAAATTCTCCGAGAGGCTTTTGCTGAGGCAGCATCTCAAGTAGCTTTGGGCAAGTCATCAGTTATCTTTATAGATGAAATAGATGCACTCTGTCCCCGTCGAGATTCTAAAAGGGAGCAAGATGTCCGAGTTGCCTCACAACTCTTTACACTCATGGACTCTAATAAACCTACTTCTTCTACAGCAGGAGTCGTTGTGGTTGCATCAACTAACAGAGTGGATGCAATTGACCCCGCTCTAAGAAGATCCGGACGTTTTGATGCTGAAATTGAAGTTACTGTCCCAAATGAAGAAGATCGCTTTCAAATTCTTAAGCTGTATACAAAAAAGATTCCATTGGATCCCAGTGTTGACATAAAAATTATTGCTGCATCATGCAATGGATATGTTGGAGCTGATTTGGAGGCATTGTGTCGTGAAGCTACCATGTTTGCAATTAAAAGGTCAAATACAAATGAAGATGCTATTAATTTCAGTTTAACAATGGAAGATTGGCAAAATGCAAGGTCCATTGTTGGTCCAAGTATAACAAGAGGTGTTACTGTTGAAGTTCCCAAAGTGACTTGGGAAGACATTGGGGGATTAAAAGATTTGAAGAAAAAACTTCAGCAAGCTGTCGAATGGCCTATTAAGCATTCTGATGCATTTTCAAGATTGGGAATATCTCCCGTACGTGGAATTCTTCTCCATGGACCTCCAGGATGCTCAAAAACAACCCTTGCTAAAGCTGCTGCTCATGCTGCCCAAGCTTCTTTCTTTTCTTTGAGTGGTGCAGAATTGTATTCAATGTATGTTGGAGAGGGGGAAGCTTTGCTCCGTAACACATTTCAGAGAGCCCGACTCGCGGCACCCAGTATAATATTCTTTGATGAGGCTGATGTTGTAGCTACAAAACGAGGTGATAGTTCAAGCAATAGTGCGACAGTTGGTGAGAGGCTTTTATCCACTTTGTTGACTGAGATTGATGGCTTAGAAGAAGCTAAAGGAATTCTTGTTCTGGCAGCAACAAATCGCCCTTATGCGATTGACGCTGCACTCATGCGTCCAGGACGTTTTGATCTGGTTCTTTATGTGCCACCGCCTGATTTGGAGGCTCGATATGAGATACTTTGTGTCCATACGCGTAATATGAAAACAGCGAGTGACGTCAATCTCAGACGACTAGCAGAAGACACTGAACTCTTTACAGGAGCTGAACTGGAGGGGTTATGCAGGGAAGCTGGAATTGTGGCTCTAAGGGAAGACATATCCGCCACCGTTGTATGTGATCGTCATTTCCAGATAGTGAAAGATTCTGTAAACCCCGCATTAACAAAAGCTGAAATTAATTCATACTCATCTTTTATGAAGACCTCATCTCAAGCTTTTCCTAGACATTTTGATTCAGATATGGAATCAGATAGGAGCAAAAAGAATGGGTTCAATCCTATGTCTTTGGTTAAAATTAGTGTTGCCAGTTTTGTATTACTTGCTGCTGCTAAATACTATAACATAGGTGGAGACCAAATTGGACCTCATACACCAATGACCTGA 1647 0.4238 MCAQLQTSLVRAVVRECGAHLKIISPHMVHRAHAGESEKILREAFAEAASQVALGKSSVIFIDEIDALCPRRDSKREQDVRVASQLFTLMDSNKPTSSTAGVVVVASTNRVDAIDPALRRSGRFDAEIEVTVPNEEDRFQILKLYTKKIPLDPSVDIKIIAASCNGYVGADLEALCREATMFAIKRSNTNEDAINFSLTMEDWQNARSIVGPSITRGVTVEVPKVTWEDIGGLKDLKKKLQQAVEWPIKHSDAFSRLGISPVRGILLHGPPGCSKTTLAKAAAHAAQASFFSLSGAELYSMYVGEGEALLRNTFQRARLAAPSIIFFDEADVVATKRGDSSSNSATVGERLLSTLLTEIDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARYEILCVHTRNMKTASDVNLRRLAEDTELFTGAELEGLCREAGIVALREDISATVVCDRHFQIVKDSVNPALTKAEINSYSSFMKTSSQAFPRHFDSDMESDRSKKNGFNPMSLVKISVASFVLLAAAKYYNIGGDQIGPHTPMT 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02797 548 SMART AAA_5 7 134 IPR003593 GO:0016887
Arst10g02797 548 SMART AAA_5 261 400 IPR003593 GO:0016887
Arst10g02797 548 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 223 481 IPR027417 -
Arst10g02797 548 ProSitePatterns AAA-protein family signature. 368 386 IPR003960 GO:0005524|GO:0016887
Arst10g02797 548 PANTHER AAA-FAMILY ATPASE 6 490 - -
Arst10g02797 548 Gene3D - 6 128 IPR027417 -
Arst10g02797 548 Gene3D - 133 214 - -
Arst10g02797 548 Gene3D - 215 399 IPR027417 -
Arst10g02797 548 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 212 IPR027417 -
Arst10g02797 548 FunFam Cell division control protein 48-B-like protein 215 399 - -
Arst10g02797 548 Pfam AAA+ lid domain 154 202 IPR041569 -
Arst10g02797 548 Pfam AAA+ lid domain 420 465 IPR041569 -
Arst10g02797 548 CDD RecA-like_CDC48_r2-like 236 396 - -
Arst10g02797 548 Pfam ATPase family associated with various cellular activities (AAA) 7 130 IPR003959 GO:0005524|GO:0016887
Arst10g02797 548 Pfam ATPase family associated with various cellular activities (AAA) 265 397 IPR003959 GO:0005524|GO:0016887
Arst10g02797 548 FunFam spermatogenesis-associated protein 5-like protein 1 399 485 - -
Arst10g02797 548 Gene3D - 400 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02797 Arst-Chr10 94223135 94228621 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02797 196 501 Calmodulin-binding Proteins AT3G56690 46.078 4.20e-84 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02797 - - gmx:100814288 886.715