Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02796 ATGCACTCTGTCCCCGTCGAGATTCTAAGGAGCAAGATGTCCGAGTTGCCTCACAACTCTTTACACTCATGGACTCTAATAAACCTACTTCTTCTACAGCAGGAGTCGTTGTGGTTGCATCAACTAACAGACAGAGTGGATGCAATTGACCCCGCTCTAAGAAGATCCGGACGTTTTGATGCTGAAATTGAAGTTACTGTCCCAAATGAAGAAGATCGCTTTCAAATTCTTAAGCTGTATACAAAAAAGATTCCATTGGATCCCAGTGTTGACATAAAAATTATTGCTGCATCATGCAATGGATATGTTGGAGCTGATTTGGAGGCATTGTGTCGTGAAGCTACCATGTTTGCAATTAAAAGGTCAAATACAAATGAAGATGCTATTAATTTCAGTTTAACAATGGAAGATTGGCAAAATGCAAGGTCCATTGTTGGTCCAAGTATAACAAGAGGTGTTACTGTTGAAGTTCCCAAAGTGACTTGGGAAGACATTGGGGGATTAAAAGATTTGAAGAAAAAACTTCAGCAAGCTGTCGAATGGCCTATTAAGCATTCTGATGCATTTTCAAGATTGGGAATATCTCCCGTACGTGGAATTCTTCTCCATGGACCTCCAGGATGCTCAAAAACAACCCTTGCTAAAGCTGCTGCTCATGCTGCCCAAGCTTCTTTCTTTTCTTTGAGTGGTGCAGAATTGTATTCAATGTATGTTGGAGAGGGGGAAGCTTTGCTCCGTAACACATTTCAGAGAGCCCGACTCGCGGCACCCAGTATAATATTCTTTGATGAGGCTGATGTTGTAGCTACAAAACGAGGTGATAGTTCAAGCAATAGTGCGACAGTTGGTGAGAGGCTTTTATCCACTTTGTTGACTGAGATTGATGGCTTAGAAGAAGCTAAAGGAATTCTTGTTCTGGCAGCAACAAATCGCCCTTATGCGATTGACGCTGCACTCATGCGTCCAGGACGTTTTGATCTGGTTCTTTATGTGCCACCGCCTGATTTGGAGGCTCGATATGAGATACTTTGTGTCCATACGCGTAATATGAAAACAGCGAGTGACGTCAATCTCAGACGACTAGCAGAAGACACTGAACTCTTTACAGGAGCTGAACTGGAGGGGTTATGCAGGGAAGCTGGAATTGTGGCTCTAAGGGAAGACATATCCGCCACCGTTGTATGTGATCGTCATTTCCAGATAGTGAAAGATTCTGTAAACCCCGCATTAACAAAAGCTGAAATTAATTCATACTCATCTTTTATGAAGACCTCATCTCAAGCTTTTCCTAGACATTTTGATTCAGATATGGAATCAGATAGGAGCAAAAAGAATGGGTTCAATCCTATGTCTTTGGTTAAAATTAGTGTTGCCAGTTTTGTATTACTTGCTGCTGCTAAATACTATAACATAGGTGGAGACCAAATTGGACCTCATACACCAATGACCTGA 1452 0.4187 MHSVPVEILRSKMSELPHNSLHSWTLINLLLLQQESLWLHQLTDRVDAIDPALRRSGRFDAEIEVTVPNEEDRFQILKLYTKKIPLDPSVDIKIIAASCNGYVGADLEALCREATMFAIKRSNTNEDAINFSLTMEDWQNARSIVGPSITRGVTVEVPKVTWEDIGGLKDLKKKLQQAVEWPIKHSDAFSRLGISPVRGILLHGPPGCSKTTLAKAAAHAAQASFFSLSGAELYSMYVGEGEALLRNTFQRARLAAPSIIFFDEADVVATKRGDSSSNSATVGERLLSTLLTEIDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARYEILCVHTRNMKTASDVNLRRLAEDTELFTGAELEGLCREAGIVALREDISATVVCDRHFQIVKDSVNPALTKAEINSYSSFMKTSSQAFPRHFDSDMESDRSKKNGFNPMSLVKISVASFVLLAAAKYYNIGGDQIGPHTPMT 483
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02796 483 ProSitePatterns AAA-protein family signature. 303 321 IPR003960 GO:0005524|GO:0016887
Arst10g02796 483 SMART AAA_5 196 335 IPR003593 GO:0016887
Arst10g02796 483 FunFam spermatogenesis-associated protein 5-like protein 1 334 420 - -
Arst10g02796 483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 416 IPR027417 -
Arst10g02796 483 PANTHER AAA-FAMILY ATPASE 38 425 - -
Arst10g02796 483 FunFam Cell division control protein 48-B-like protein 150 334 - -
Arst10g02796 483 Pfam AAA+ lid domain 355 400 IPR041569 -
Arst10g02796 483 Pfam AAA+ lid domain 89 137 IPR041569 -
Arst10g02796 483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 147 IPR027417 -
Arst10g02796 483 Gene3D - 335 419 - -
Arst10g02796 483 Gene3D - 32 150 IPR027417 -
Arst10g02796 483 CDD RecA-like_CDC48_r2-like 171 331 - -
Arst10g02796 483 Gene3D - 151 334 IPR027417 -
Arst10g02796 483 Gene3D - 68 143 - -
Arst10g02796 483 Pfam ATPase family associated with various cellular activities (AAA) 200 332 IPR003959 GO:0005524|GO:0016887
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Arst10g02796 Arst-Chr10 94223135 94228621 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02796 131 440 Calmodulin-binding Proteins AT3G56690 45.833 1.24e-84 279
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02796 - - adu:107470970 910.983