Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02795 ATGTGTGCCCAATTGCAGACGAGTTTGGTTCGAGCAGTGGTTCGGGAATGTGGGGCGCATTTGAAAATTATTAGTCCGCACATGGTGCACAGAGCACATGCCGGTGAAAGTGAGAAAATTCTCCGAGAGGCTTTTGCTGAGGCAGCATCTCAAGTAGCTTTGGGCAAGTCATCAGTTATCTTTATAGATGAAATAGATGCACTCTGTCCCCGTCGAGATTCTAAGGAGCAAGATGTCCGAGTTGCCTCACAACTCTTTACACTCATGGACTCTAATAAACCTACTTCTTCTACAGCAGGAGTCGTTGTGGTTGCATCAACTAACAGAGTGGATGCAATTGACCCCGCTCTAAGAAGATCCGGACGTTTTGATGCTGAAATTGAAGTTACTGTCCCAAATGAAGAAGATCGCTTTCAAATTCTTAAGCTGTATACAAAAAAGATTCCATTGGATCCCAGTGTTGACATAAAAATTATTGCTGCATCATGCAATGGATATGTTGGAGCTGATTTGGAGGCATTGTGTCGTGAAGCTACCATGTTTGCAATTAAAAGGTCAAATACAAATGAAGATGCTATTAATTTCAGTTTAACAATGGAAGATTGGCAAAATGCAAGGTCCATTGTTGGTCCAAGTATAACAAGAGGTGTTACTGTTGAAGTTCCCAAAGTGACTTGGGAAGACATTGGGGGATTAAAAGATTTGAAGAAAAAACTTCAGCAAGCTGTCGAATGGCCTATTAAGCATTCTGATGCATTTTCAAGATTGGGAATATCTCCCGTACGTGGAATTCTTCTCCATGGACCTCCAGGATGCTCAAAAACAACCCTTGCTAAAGCTGCTGCTCATGCTGCCCAAGCTTCTTTCTTTTCTTTGAGTGGTGCAGAATTGTATTCAATGTATGTTGGAGAGGGGGAAGCTTTGCTCCGTAACACATTTCAGAGAGCCCGACTCGCGGCACCCAGTATAATATTCTTTGATGAGGCTGATGTTGTAGCTACAAAACGAGGTGATAGTTCAAGCAATAGTGCGACAGTTGGTGAGAGGCTTTTATCCACTTTGTTGACTGAGATTGATGGCTTAGAAGAAGCTAAAGGAATTCTTGTTCTGGCAGCAACAAATCGCCCTTATGCGATTGACGCTGCACTCATGCGTCCAGGACGTTTTGATCTGGTTCTTTATGTGCCACCGCCTGATTTGGAGGCTCGATATGAGATACTTTGTGTCCATACGCGTAATATGAAAACAGCGAGTGACGTCAATCTCAGACGACTAGCAGAAGACACTGAACTCTTTACAGGAGCTGAACTGGAGGGGTTATGCAGGGAAGCTGGAATTGTGGCTCTAAGGGAAGACATATCCGCCACCGTTGTATGTGATCGTCATTTCCAGATAGTGAAAGATTCTGTAAACCCCGCATTAACAAAAGCTGAAATTAATTCATACTCATCTTTTATGAAGACCTCATCTCAAGCTTTTCCTAGACATTTTGATTCAGATATGGAATCAGATAGGAGCAAAAAGAATGGGTTCAATCCTATGTCTTTGGTTAAAATTAGTGTTGCCAGTTTTGTATTACTTGCTGCTGCTAAATACTATAACATAGGTGGAGACCAAATTGGACCTCATACACCAATGACCTGA 1644 0.424 MCAQLQTSLVRAVVRECGAHLKIISPHMVHRAHAGESEKILREAFAEAASQVALGKSSVIFIDEIDALCPRRDSKEQDVRVASQLFTLMDSNKPTSSTAGVVVVASTNRVDAIDPALRRSGRFDAEIEVTVPNEEDRFQILKLYTKKIPLDPSVDIKIIAASCNGYVGADLEALCREATMFAIKRSNTNEDAINFSLTMEDWQNARSIVGPSITRGVTVEVPKVTWEDIGGLKDLKKKLQQAVEWPIKHSDAFSRLGISPVRGILLHGPPGCSKTTLAKAAAHAAQASFFSLSGAELYSMYVGEGEALLRNTFQRARLAAPSIIFFDEADVVATKRGDSSSNSATVGERLLSTLLTEIDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARYEILCVHTRNMKTASDVNLRRLAEDTELFTGAELEGLCREAGIVALREDISATVVCDRHFQIVKDSVNPALTKAEINSYSSFMKTSSQAFPRHFDSDMESDRSKKNGFNPMSLVKISVASFVLLAAAKYYNIGGDQIGPHTPMT 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02795 547 Gene3D - 399 482 - -
Arst10g02795 547 Gene3D - 6 127 IPR027417 -
Arst10g02795 547 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 211 IPR027417 -
Arst10g02795 547 FunFam Cell division control protein 48-B-like protein 214 398 - -
Arst10g02795 547 Pfam ATPase family associated with various cellular activities (AAA) 7 129 IPR003959 GO:0005524|GO:0016887
Arst10g02795 547 Pfam ATPase family associated with various cellular activities (AAA) 264 396 IPR003959 GO:0005524|GO:0016887
Arst10g02795 547 Gene3D - 214 398 IPR027417 -
Arst10g02795 547 Pfam AAA+ lid domain 153 201 IPR041569 -
Arst10g02795 547 Pfam AAA+ lid domain 419 464 IPR041569 -
Arst10g02795 547 SMART AAA_5 7 133 IPR003593 GO:0016887
Arst10g02795 547 SMART AAA_5 260 399 IPR003593 GO:0016887
Arst10g02795 547 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 222 480 IPR027417 -
Arst10g02795 547 FunFam spermatogenesis-associated protein 5-like protein 1 398 484 - -
Arst10g02795 547 Gene3D - 132 213 - -
Arst10g02795 547 CDD RecA-like_CDC48_r2-like 235 395 - -
Arst10g02795 547 ProSitePatterns AAA-protein family signature. 367 385 IPR003960 GO:0005524|GO:0016887
Arst10g02795 547 PANTHER AAA-FAMILY ATPASE 6 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02795 Arst-Chr10 94223135 94228621 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02795 195 504 Calmodulin-binding Proteins AT3G56690 45.833 3.48e-84 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02795 - - gmx:100814288 880.167