Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02783 ATGCAAGACTCACCTTCCACCGCCCCCGCTGGTGGCAGGTTTTTCGGCGGAGGAGTCGGAGACAGGAGGCTCAGGCCTCACAACCAGCACCAGGAACCGTTGAAGTGCCCTCGCTGTGATTCGCTCAACACTAAGTTCTGCTATTACAACAACTACAACCTCTCTCAGCCGCGCCACTTCTGCAAGAACTGTCGCCGCTACTGGACCAACGGCGGCGTCCTCCGTAACGTCCCCGTCGGCGGAGGTTGTCGGAAATCCAAATCCAAGCGCTCCAACGCGAAGTCCAAGAAAAGCAACAACAACAACTGCTCCTCCTCTTTGGAAGCCGCTCCGGAAACAACAACACCGCAACCGCAATTGCCGGAGGGAAATTCGAACTCGAACTCGAACTCTGGCAGCGAAAGCTCCAGCCTCACCGCCATCGCCACTAGCTCCGCCACCACGGAGGCGGCGTCTGCGGCGACGTCAAACGCTGCGTTGAGCAAGAATCCGGTCCCCGACGAGAACGTGAATAACTCTAACTTCACTGATGGCGGTGGTTATTACGGTGGCTTCTCTGACATAGGAACATTCACGAGCCTTATGAGTTCAGCAAACGAAACGATGTCGTTTGGTTTTGAAAACAATGTTAACGTTCTCGATGCGACGTCGTTTCGTTTCGGTAACGATGATGGCGGGTGGCTGCAGCAGAAAGTTATCGGAAATGGAAGCGACGATCGGCGTAATAATAATAATAATAATAATCAGGAGTTTGCAACGGAGCCGTTGATGCTGGATCAGACGGGTCCTGTTGAGTTGTCGTCGCTGCAGAATGGGAAAGTTGGCAACGGAGGATGTGGACCGTTGGATTGGCATGCAGCTGGTGGTGATGGTTCTGATCATGATCATGATTTGTTTGATCTTACTAGCGCCGTTGATCAGAGTTACTGGACCCACACTCACTGGTCTGATCAAGATAACAGTCCAAATCTCTTTCATCTTCCTTGA 987 0.5248 MQDSPSTAPAGGRFFGGGVGDRRLRPHNQHQEPLKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTNGGVLRNVPVGGGCRKSKSKRSNAKSKKSNNNNCSSSLEAAPETTTPQPQLPEGNSNSNSNSGSESSSLTAIATSSATTEAASAATSNAALSKNPVPDENVNNSNFTDGGGYYGGFSDIGTFTSLMSSANETMSFGFENNVNVLDATSFRFGNDDGGWLQQKVIGNGSDDRRNNNNNNNQEFATEPLMLDQTGPVELSSLQNGKVGNGGCGPLDWHAAGGDGSDHDHDLFDLTSAVDQSYWTHTHWSDQDNSPNLFHLP 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02783 328 ProSitePatterns Zinc finger Dof-type signature. 36 72 IPR003851 GO:0003677|GO:0006355
Arst10g02783 328 MobiDBLite consensus disorder prediction 78 144 - -
Arst10g02783 328 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 27 205 IPR045174 GO:0003700|GO:0006355
Arst10g02783 328 Pfam Dof domain, zinc finger 32 88 IPR003851 GO:0003677|GO:0006355
Arst10g02783 328 ProSiteProfiles Zinc finger Dof-type profile. 34 88 IPR003851 GO:0003677|GO:0006355
Arst10g02783 328 MobiDBLite consensus disorder prediction 95 144 - -
Arst10g02783 328 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02783 Arst-Chr10 93838315 93839520 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02783 21 328 C2C2-Dof Transcription Factor Family AT5G60850 39.375 6.15e-49 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Arst10g02783 zf-Dof 5.9e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02783 - - gmx:778116 263.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g02783 10 93838315 93839520 Arst10g02783 10 93838315 93839520 ECH
Arst1g04093 1 102900810 102902390 Arst10g02783 10 93838315 93839520 PCT