Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02670 ATGCAAAAGGAAAAGGAATCAATCACCACCAATAAGGAGGGGACTAATAAGAAGGAGATAGAAATAATGGAAGGTTGCAATGGAAAGGAGGAAACCCTACCACCTGGGTTTCGATTTCATCCAACCGACGAAGAACTCATTACTTGCTATCTCATAAACAAGATCTCGGATTCAAACTTTTCAGGCAGGGCAATAACTGATGTTGATCTCAATAAATGTGAGCCATGGGAGCTTCCAGGGAAGGCGAAGATGGGAGAAAAAGAATGGTACTTCTTCAGCCTGAGGGACCGGAAGTACCCAACTGGGGTGCGAACGAACCGAGCCACGAACACCGGGTATTGGAAGACCACCGGAAAAGACAAAGAGATCCTTAATAGTGTTACATCGGAGCTAATTGGGATGAAGAAAACTTTGGTTTTCTACAAAGGAAGAGCCCCCAGGGGAGAGAAGAGTAATTGGGTCATGCATGAATATCGCATTCATTCTAAATCCACCTTTCGAACAACCAAGCAGGATGAATGGGTGGTTTGCCGTGTGTTCCAGAAGAGTGCCGGGGCAAAGAAGTACCCTTCTTCCAACCATGCAAGTAGGGCAATGAACCCTTTCAACCTTGAAATAGGTCACCACAATATTGTGCCGCCGCCGCCAATGATGCAACTCGGAGACCCTGCCGCCGCTCATTTCCTCTATGGAAGGAACTATATGAATACTGCAGAGTTAGCAGAAGTAGCTAGGGTTTTGCGTGTTGGTACTGGATCAACCAGTACCAACCTGCCCGGGATGCAGCCTCAGATAAATTATCCAGTGGCTGCGTCTCCAGGAATTGGATTCACAATTTCAGGACTCAATTTAAATCTAGGAGGCGGAGGAGGCGAAACAGTAGTGGCCACAACACAACCAGTTTTGCGGCCCATGCAGCCGACTCCTCCGTCCCAAACATTGGGTATGGTTCCTCATCATCAAGTTCATCATGATGTGAGTTCCAACATGATTTCAACAAATTCCCTTGGTGCTGAGAATGTGGGTTACGTCAATGAAATAAGCAACACAAATGGTGGTCATGGAAATAGGTTTATGGGCATGGATCATTGCATGGATCTTGATAATTACTGGCCTTCCTACTAA 1125 0.4622 MQKEKESITTNKEGTNKKEIEIMEGCNGKEETLPPGFRFHPTDEELITCYLINKISDSNFSGRAITDVDLNKCEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEILNSVTSELIGMKKTLVFYKGRAPRGEKSNWVMHEYRIHSKSTFRTTKQDEWVVCRVFQKSAGAKKYPSSNHASRAMNPFNLEIGHHNIVPPPPMMQLGDPAAAHFLYGRNYMNTAELAEVARVLRVGTGSTSTNLPGMQPQINYPVAASPGIGFTISGLNLNLGGGGGETVVATTQPVLRPMQPTPPSQTLGMVPHHQVHHDVSSNMISTNSLGAENVGYVNEISNTNGGHGNRFMGMDHCMDLDNYWPSY 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02670 374 ProSiteProfiles NAC domain profile. 33 182 IPR003441 GO:0003677|GO:0006355
Arst10g02670 374 FunFam NAC domain-containing protein 100-like 42 187 - -
Arst10g02670 374 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 30 236 - -
Arst10g02670 374 Gene3D NAC domain 42 186 IPR036093 GO:0003677|GO:0006355
Arst10g02670 374 Pfam No apical meristem (NAM) protein 34 160 IPR003441 GO:0003677|GO:0006355
Arst10g02670 374 SUPERFAMILY NAC domain 30 182 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02670 Arst-Chr10 92127433 92130802 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02670 29 374 NAC Transcription Factor Family AT2G24430 51.676 2.08e-112 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst10g02670 NAM 3.8e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02670 - - gmx:100804931 534.258