Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02665 ATGGTAGCTGTGGAAACTAATCGCGTGATGGAAAGGGAACGAACCCGCAAACGTCCTCGTCTCGCGTGGGACGTGCCTCCACCACCACCACCACCATCCCAGCAGGCTGAAAGGGGTGTGGTTGATGAAGGAATCGAAAAGAGGCACGCCTCGCCTCCAAGAAGGGACGACGATCGTGAAGGCCATTATGTCTTCAATCTTGGCGAAAATCTCACTCCTAGATATAAAATCCTCAGCAAGATGGGTGAAGGCACATTTGGTCGAGTTTTGGAATGTTGGGATCGCCAAGCCAGAGAATACGTTGCTGTCAAGGTAATTAGGAGCATTCGGAAATACCGCGAAGCAGCAATGCTTGAAATTGATGTGCTTCAACGTCTGTCTAAGGGTGAAATAGGAATCTCACGCTGTGTGCAGATCCGGAATTGGTTTGATTACCGAAATCACATATGCATTGTCTTTGAGAAGCTTGGACCAAGCTTATTTGATTTTCTAAAGAGAAATAAATACTGCCCATTCCCTGTGGACCTTGTTCGGGAATTTGGACGACAGCTTTTGGAATCTGTAGCATATATGCATGAACTACATCTAATCCACACTGACCTGAAGCCAGAAAATATACTTCTTATTTCTTCTGAATATGTAAAGCTCCCTACCCGTAAGAGGATTACCTCAGGTGAAATGCAATTCAGATGCTTGCCCAAGTCTAGTGCCATTAAGCTGATTGATTTTGGTAGTACTGCTTTTGATCATCAGATTCATAACTCCATTGTTTCTACAAGGCATTACAGAGCCCCTGAGATCATTCTAGGTATAGGGTGGTCCTACCCGTGTGATTTGTGGAGTGTTGGTTGTATTCTTATCGAACTATTAACAGGTGAAGCATTGTTTCAAACTCATGAAAACTTGGAACACCTGGCAATGATGGAGAGAGTGCTGGGACCTATACCCGAACACATGGTCCGAAGGTCTACCCGAGGAGCAGAGAAATATTTCAGGCGTGGAGCAAGACTAAATTGGCCTGAAGGAGCTGTTTCAAGGGAAAGCATCCGTGCTGTTAAGAAGCTCGATCTTCTTGAGGATATTGTATCAAGCCGTGTGGATTCTTCAAGATCATCTTTAACTGATTTGTTACATGGCTTATTGACTTATGATCCGAATGAACGCCTAACAGCTCGACAAGCCCTTGATCATCCCTTCTTTAGAAATCCAACTTAA 1215 0.4453 MVAVETNRVMERERTRKRPRLAWDVPPPPPPPSQQAERGVVDEGIEKRHASPPRRDDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQAREYVAVKVIRSIRKYREAAMLEIDVLQRLSKGEIGISRCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHELHLIHTDLKPENILLISSEYVKLPTRKRITSGEMQFRCLPKSSAIKLIDFGSTAFDHQIHNSIVSTRHYRAPEIILGIGWSYPCDLWSVGCILIELLTGEALFQTHENLEHLAMMERVLGPIPEHMVRRSTRGAEKYFRRGARLNWPEGAVSRESIRAVKKLDLLEDIVSSRVDSSRSSLTDLLHGLLTYDPNERLTARQALDHPFFRNPT 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02665 404 FunFam Serine/threonine-protein kinase AFC2 151 400 - -
Arst10g02665 404 Gene3D Phosphorylase Kinase; domain 1 62 155 - -
Arst10g02665 404 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 34 402 - -
Arst10g02665 404 SUPERFAMILY Protein kinase-like (PK-like) 62 402 IPR011009 -
Arst10g02665 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Arst10g02665 404 MobiDBLite consensus disorder prediction 1 61 - -
Arst10g02665 404 CDD PKc_CLK 62 400 - -
Arst10g02665 404 FunFam Serine/threonine-protein kinase AFC2 62 155 - -
Arst10g02665 404 ProSiteProfiles Protein kinase domain profile. 75 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g02665 404 Pfam Protein kinase domain 75 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g02665 404 Gene3D Transferase(Phosphotransferase) domain 1 129 400 - -
Arst10g02665 404 SMART serkin_6 75 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g02665 404 MobiDBLite consensus disorder prediction 7 21 - -
Arst10g02665 404 MobiDBLite consensus disorder prediction 40 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02665 Arst-Chr10 92088381 92092338 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02665 74 402 Core Cell Cycle Gene Families AT3G48750 27.381 6.83e-27 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Arst10g02665 Pkinase 3.3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02665 K08287 - gmx:100782453 681.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g02665 10 92088381 92092338 Arst10g02665 10 92088381 92092338 ECH