Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02639 ATGCTAATACCCTATGTGTTCTTCCTTCTGGGGTTTTCACTTATAAGCATAGGAGGTGGACCTAAATGGAAAGATTCTAATTCTTCTTCTCAGTTCATCATTATTGGTTCCGGTTATTTCATATTTGTTGTTGCCTACATCCTATTTATTATAGCGGACAAGTTTTTGCCTATATATTTGAGGGATAGTAGCTCATCGGAGAATAATACTATTGAGATCACAAGAAATATGAGAGTGGTTCCTTGGTTGGATGAAGATGGACATTTTATGATAACGATTCAATCTTTTGATTCCGAAGAGACACAAGAACTCACGGAGTTGCCTTTTAGTCGGAGTATGCGGATGGCTAGACTTGCTTTGAAGGCATTGCCGCCGGTTAAGAGCTTCGCTAAGGAGGAGGAGGACGAGGACGGATTAGTCGACCGGAGAAACAATTTTTGTCCTATTTGTATTGAAGAGTTTAAGGATGGAGAGTTAATTCAACCTTTTGGAGTGTGTGTTCATGAGTTTCATTCGGCTTGTATAAACTCTTGGTTACACTCTGGAAAAACTAGTTGTCCGCTTTGTCGTGAAGATTTAGCTACTTTTATGAATTGA 597 0.392 MLIPYVFFLLGFSLISIGGGPKWKDSNSSSQFIIIGSGYFIFVVAYILFIIADKFLPIYLRDSSSSENNTIEITRNMRVVPWLDEDGHFMITIQSFDSEETQELTELPFSRSMRMARLALKALPPVKSFAKEEEDEDGLVDRRNNFCPICIEEFKDGELIQPFGVCVHEFHSACINSWLHSGKTSCPLCREDLATFMN 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02639 198 CDD RING-H2 147 190 - -
Arst10g02639 198 Pfam Ring finger domain 147 190 IPR001841 -
Arst10g02639 198 SUPERFAMILY RING/U-box 119 195 - -
Arst10g02639 198 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 95 195 IPR013083 -
Arst10g02639 198 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 31 192 IPR044675 -
Arst10g02639 198 ProSiteProfiles Zinc finger RING-type profile. 147 190 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02639 Arst-Chr10 91331106 91331702 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02639 138 193 C3H Transcription Factor Family AT3G10910 42.857 4.38e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02639 - - ahf:112718325 397.897