Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02624 ATGACTTCGCCATTTACTTTCTTTTGGGAAGTGTCATCTCCCCCATTGTTACAAGAACTGGATGCAGATTTGCGACATTATGTAACCCTCATGAGAGATCAAATAACAGATTACTTCATTCTCAAGGTACAAGTTACGCATCAAACTTGCTGGACTCATCATCAACAACCACAATCACATCCACCAGTGTTAGGAGCCATTGATTCGTTTGCATCCTCAATTCTAATCCAAGCGCAAGCATTCCTTCAAAACGGTTCATCACACATGCAAATGCACTTCCCTGATGCTATTATACCAATCGTCTTGATTGATAACATGATGCCAGATATCATATCCTACGCAAAAGCCATAATTCAAACTCGTCGTTCCGGATTCCTCTATGAAAGACCTGATTTTCGTTTGTTCAGTTTGAATTTGGACATTATTATCCAGAATTCTATATTGTACGTTCAAGACTTGAGTATCCAGAATTTGTCATTGGAAGTTGATGACTACGACAACATGATCACCGACTTAATCGTTGAAGAGTCTATGGGAGATACTAATAATATTAAGATGGTTCCTGCGTCGAAGAATGCCATTGAGTCTCTTGAGAAAGTGAAGCTTGAGAATAATAACCACCTAGTAGAGAGGTGCACTATTTGTCTAACTGAATTTGATTATGGTGATGATGCAGAACAAGTTTCATCAATGCCTTGTAAGCATGTATATCATCAAGAATGCCTCGCGCAATGGCTCAAGACTAGTCATTTATGTCCTTTATGTCGGTATCCGATGCCAACTAATTAG 789 0.3904 MTSPFTFFWEVSSPPLLQELDADLRHYVTLMRDQITDYFILKVQVTHQTCWTHHQQPQSHPPVLGAIDSFASSILIQAQAFLQNGSSHMQMHFPDAIIPIVLIDNMMPDIISYAKAIIQTRRSGFLYERPDFRLFSLNLDIIIQNSILYVQDLSIQNLSLEVDDYDNMITDLIVEESMGDTNNIKMVPASKNAIESLEKVKLENNNHLVERCTICLTEFDYGDDAEQVSSMPCKHVYHQECLAQWLKTSHLCPLCRYPMPTN 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02624 262 SMART ringv_2 211 256 IPR011016 GO:0008270
Arst10g02624 262 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 175 261 IPR013083 -
Arst10g02624 262 SUPERFAMILY RING/U-box 193 260 - -
Arst10g02624 262 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 54 260 - -
Arst10g02624 262 SMART ring_2 212 255 IPR001841 -
Arst10g02624 262 Pfam Ring finger domain 211 256 IPR001841 -
Arst10g02624 262 ProSiteProfiles Zinc finger RING-type profile. 212 256 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02624 Arst-Chr10 90905269 90906057 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02624 174 260 C3H Transcription Factor Family AT1G18760 41.379 3.20e-19 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02624 - - adu:110276959 539.265