Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02606 ATGGAGCAGAGCGAAACGGCTTTGGATCTAGCTCCGAGGAAATTGGTGAGGCAGTTGGATTTCACAGCACACCTGAAACTGCCGCCGACTCCGCCGCCGCAGTCGCTGGCACAGGCGATTCCGCGAACGCCATCACGATCACCGTTGCAATTGCAATTGACTCTGCATCCGCTAGGGCAACAGCAACAACAGCAGCAACAACCGCAGCCGTGGTTGTTTTCGCAGGGACAGCAGCTGAGAGCGCCGCCGCAGTCGCCAGCAGTGCGGCAGCAAAAGCTTTCGCCGGTTCCTCGAATTCCGTACACTGTGCAGAAGCTTCCGGTAAAGGCGTTCAAAGTGTCGAAGCAGGAGTCTCCCAGTCCCAGGTCACAACCTTGGCATAATGTTGAATTGAAAGACAGCACTCCAAAGAAATCAAAACAATGTAACTGCAAAAATTCTCGATGCCTCAAATTGTACTGTGAATGCTTTGCGTCTGGGATGTATTGTGATGGTTGCAATTGTACAAATTGTCAAAACAATGTGGATAATGAGGCAGCCAGACAGGAGGCTGTTGGACTAACATTAGAGCGCAATCCAAATGCTTTCAGACCAAAAATTGCTAGCAGTCCACAAGAAACTCGAGATTCCAAGGAAACTGATCCTATAGTTACACCATCGACATCTCAGTCAACTGCCTTTTATGTTGACACTGCCAACACTAGAAATTCAGGTTATTCAAGATCTACATACAGGTCACCATTGGCGGATGTCCTCCAGCCACAAAATGTGAAGAATCTCTGTTCACTTTTTGTTGTTCTCTCAGGAGTAGCTGCCAAAACGAATGCAGAAATGAGAGCCAAAGTAGGCCTGAACGTTGATGCTGGGAAATTTAAATCTTCTATTCCTTCATCAACTCAGTTGCTGCAAGACAGGGAAGATGTCCGCAAGTTTGTATGTGATGATCATAAAGATGAAGTAGATAGAGTTGATATTGACTGTTATAATAGGCCACTTTCACCAGAAACCCTATCACTGATGTGTGATGAACAAGATGAGGTGTTTTTCAATAATGGTTCTGCAAATAGAGTGGCATGCAACAATTTTCAAAGTATTGTTCAAAAGTCATCTACTTCTGATCGATGCCCTGATGTGTATGAGGAGCAAGAAAGGGTTGTACTCACAAAGTTCTGGGATGTTCTACGTGGACTCATTACTGTTGGAAGCATAAAAGAAACAATGTGCTCTTCATTAGCCAAGAAAGATGGGGGAAGCGAGGAAGAACCTGCAGCCAACAGTAATGGTGCTGAAGTTGATATAGGGAGTGAAAAGAAGGAAACTCCCAGCAACTGTGTTGCAAGGTGCCCCATCTCATCATCGGCCATTGAAATATCTCAGAAAAAGCATGCAATGATCAATGGCAATGATGATCTTGATCTCTCCTTAAGGTTTGCTTGCCAATTTTATGGAAGGGAATGA 1458 0.452 MEQSETALDLAPRKLVRQLDFTAHLKLPPTPPPQSLAQAIPRTPSRSPLQLQLTLHPLGQQQQQQQQPQPWLFSQGQQLRAPPQSPAVRQQKLSPVPRIPYTVQKLPVKAFKVSKQESPSPRSQPWHNVELKDSTPKKSKQCNCKNSRCLKLYCECFASGMYCDGCNCTNCQNNVDNEAARQEAVGLTLERNPNAFRPKIASSPQETRDSKETDPIVTPSTSQSTAFYVDTANTRNSGYSRSTYRSPLADVLQPQNVKNLCSLFVVLSGVAAKTNAEMRAKVGLNVDAGKFKSSIPSSTQLLQDREDVRKFVCDDHKDEVDRVDIDCYNRPLSPETLSLMCDEQDEVFFNNGSANRVACNNFQSIVQKSSTSDRCPDVYEEQERVVLTKFWDVLRGLITVGSIKETMCSSLAKKDGGSEEEPAANSNGAEVDIGSEKKETPSNCVARCPISSSAIEISQKKHAMINGNDDLDLSLRFACQFYGRE 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02606 485 MobiDBLite consensus disorder prediction 116 130 - -
Arst10g02606 485 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 140 174 IPR005172 -
Arst10g02606 485 MobiDBLite consensus disorder prediction 24 51 - -
Arst10g02606 485 PANTHER TESMIN/TSO1-RELATED 230 398 IPR028307 -
Arst10g02606 485 ProSiteProfiles CRC domain profile. 138 203 IPR005172 -
Arst10g02606 485 MobiDBLite consensus disorder prediction 113 138 - -
Arst10g02606 485 MobiDBLite consensus disorder prediction 413 442 - -
Arst10g02606 485 SMART CXC_2 137 177 IPR033467 -
Arst10g02606 485 MobiDBLite consensus disorder prediction 193 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02606 Arst-Chr10 90359353 90364524 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02606 137 413 CPP Transcription Factor Family AT4G29000 32.622 1.47e-31 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Arst10g02606 TCR 4.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02606 - K21776 gmx:100811459 318.161