Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02530 ATGAGATTGCGCATCGCGATTGATTCGGCCAAAGGAATACTATATCTGCATACTGAGGCGAATCCTCCGATATTCCATCGAGATATCAAAGCATCAAACATACTCCTAGACTCCAAGATCATTGCTAAAGTAGCAGATTTTGGACTGTCGCGGCTTGCACCACACCTAGATGAAGGGAATGAACCTAAATATGTGTCAACAGTTGTGAAGGGAACACCAGGTTATCTAGATCCAGAGTACTTGTTAACTCATAAATTGACAGATAAGAGCGATGTCTATAGTCTTGGAGTTGTGTTTATGGAGCTTTTGACTGGCATGCAGCCACTATCACATGGAAAAAACATTGTTTGCGAGAGGGTGCTGTCGCCCCCAGAGGGACAAACTGTGGGTGTCGTCGTTGCTCGTGGAAGGTCTGCTCGCTTCTCCTCACCGTCCCTCTTCGAGCTCACTCTGTCTCTCTCGCTGGGATGTCTCTCTCTGATCAGCTGTGGAGTATTCGCCGCGCCGGCACCTTCCTTCCTCCCTCAATTCTCGCAACCTTGA 543 0.4807 MRLRIAIDSAKGILYLHTEANPPIFHRDIKASNILLDSKIIAKVADFGLSRLAPHLDEGNEPKYVSTVVKGTPGYLDPEYLLTHKLTDKSDVYSLGVVFMELLTGMQPLSHGKNIVCERVLSPPEGQTVGVVVARGRSARFSSPSLFELTLSLSLGCLSLISCGVFAAPAPSFLPQFSQP 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02530 180 Pfam Protein kinase domain 10 113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g02530 180 SUPERFAMILY Protein kinase-like (PK-like) 2 114 IPR011009 -
Arst10g02530 180 SMART serkin_6 1 152 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g02530 180 PANTHER RECEPTOR-LIKE PROTEIN 55 2 157 - -
Arst10g02530 180 ProSitePatterns Serine/Threonine protein kinases active-site signature. 24 36 IPR008271 GO:0004672|GO:0006468
Arst10g02530 180 ProSiteProfiles Protein kinase domain profile. 1 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g02530 180 Gene3D Transferase(Phosphotransferase) domain 1 1 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02530 Arst-Chr10 88641391 88642582 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02530 1 157 Receptor kinase-like Gene Family AT5G01950 65.823 6.47e-59 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Arst10g02530 Pkinase 3.3e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02530 - - lja:Lj1g3v2536140.1 208.764