Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02525 ATGGAAGCTCAAGAGTTGTTTGAGCAGCAGCAAGACAATAATGCCCCGAGTTCTGAGCATTTCATGGTTGAGGAATTCTTTGATTTCTCGAACGAAGAAGCAGCTACTGCTCCGTTTATTCCCAACACCACCACCACCAACTCCACCCACTCCTCCCCCACTGCCCTAGACAGCATCAATTCCTCTTCCACGAACCCCAATTTCCTGACCGCCGACCTCTCCGTCCCGTACGATGATCTTGCTGAACTGGAATGGTTATCCAATTTCACCGAGGAATCATTTTCGAGCGAGGACCTGCAGAGGATGCAGCTCATATCAGGCATAAAGGCCCGAAGCGACACCGAGGCCCGTGAATTCCACCACCAAGTTGAGCCCAACCGAGCCAACTCAATACTCAACCCACAACTGTCGGTTCCAGCTAAGGCCCGAAGCAAGCGCTCGCGTGGGCCGACATGCAACTGGAACTCCCGCCTCCTCGTGGTGTCCCCAACCACATCATCTTCCCAGCCCGAGCCCATGGCTCTTCCCAAGAAGCCCGTGGCAAGGAAGAAGGACAGCAGAGATGAAGAAGGGGAGGGCAGGAAGTGCCTGCATTGCGCCACAGACAAGACACCTCAGTGGCGGACAGGGCCCATGGGCCCAAAGACATTGTGCAATGCATGCGGAGTGAGGTATAAGTCGGGCCGGCTGGTGCCTGAGTATAGGCCGGCTGCCAGCCCGACTTTCGTGCTGACTAAGCACTCAAACTCGCACCGGAAGGTTCTGGAGTTGCGGCGCCAAAAGGAGATGATGCGGGCCCAGCAACAACATCAGCAGCAACTGCTTCATCATCACCATCACCAGAGCATCATGTTTGATGTCTCATCCAACGGTCAGGATTACTTGATCCATCAGCAACTGGGTCCCCATTTTGGCCACCTAATCTAG 927 0.548 MEAQELFEQQQDNNAPSSEHFMVEEFFDFSNEEAATAPFIPNTTTTNSTHSSPTALDSINSSSTNPNFLTADLSVPYDDLAELEWLSNFTEESFSSEDLQRMQLISGIKARSDTEAREFHHQVEPNRANSILNPQLSVPAKARSKRSRGPTCNWNSRLLVVSPTTSSSQPEPMALPKKPVARKKDSRDEEGEGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKEMMRAQQQHQQQLLHHHHHQSIMFDVSSNGQDYLIHQQLGPHFGHLI 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02525 308 MobiDBLite consensus disorder prediction 161 194 - -
Arst10g02525 308 ProSiteProfiles GATA-type zinc finger domain profile. 190 226 IPR000679 GO:0006355|GO:0043565
Arst10g02525 308 PIRSF Txn_fac_GATA_plant 1 286 IPR016679 GO:0003677|GO:0005634|GO:0045893
Arst10g02525 308 MobiDBLite consensus disorder prediction 39 59 - -
Arst10g02525 308 Pfam GATA zinc finger 196 229 IPR000679 GO:0006355|GO:0043565
Arst10g02525 308 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 191 254 - -
Arst10g02525 308 SMART GATA_3 190 240 IPR000679 GO:0006355|GO:0043565
Arst10g02525 308 MobiDBLite consensus disorder prediction 177 194 - -
Arst10g02525 308 FunFam GATA transcription factor 185 273 - -
Arst10g02525 308 Gene3D - 185 274 IPR013088 GO:0006355|GO:0008270
Arst10g02525 308 ProSitePatterns GATA-type zinc finger domain. 196 221 IPR000679 GO:0006355|GO:0043565
Arst10g02525 308 PANTHER GATA TRANSCRIPTION FACTOR 9 271 - -
Arst10g02525 308 CDD ZnF_GATA 195 242 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02525 Arst-Chr10 88583978 88585366 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02525 15 308 C2C2-Gata Transcription Factor Family AT4G32890 47.436 1.74e-88 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Arst10g02525 GATA 2.7e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02525 - - qsa:O6P43_015488 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g02525 10 88583978 88585366 Arst10g02525 10 88583978 88585366 ECH