Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02523 ATGATGGCGGTGAGTTCGGGGAGCAAAGAAGGAGGAGGGAGTAAGGTGATGATGGACAACGGCAAGTACGTGAGGTACACGCCGGAGCAGGTGGAGGCACTGGAGAGGCTCTACCATGAATGCCCCAAACCAAGCTCCCTTCGCCGCCAGCAACTCATCAGAGACTGCCCTATTCTCTCCAACATCGAGCCCAAACAGATCAAAGTCTGGTTCCAAAATCGAAGATGCCGAGAGAAGCAGCGGAAAGAGGCGTCACGGCTGCAAGCTGTAAACAGGAAGCTGACAGCAATGAATAAACTGCTGATGGAGGAAAACGACAGATTGCAGAAGCAAGTCTCTCACCTCGTCTATGAGAACACCTTTTTCCGCCAACACACTCAACAAAATGCGGCGCTTGCCACCACAGACACCAGCTGTGAGTCGGTGGTAACAAGCGGTCAGCGCAACTTGACACCTCAGCATCCGCCAAGGGATGCAAGCCCTGCAGGACTTTTGTCGATTGCAGAGGAGACTTTAGCAGAGTTTCTATCAAAGGCCACTGGAACCGCTGTGGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGGTTGCCCTGGAGTGGCAGCACGTGCATGCGGCCTTGTGGGTCTAGAACCTGCCAGGGTTGCAGAAATACTCAAAGATCGGTTATCATGGTATCGTGATTGCCGAACCGTGGATGTTCTAAATGTAATGTCCACGGGAAATGGAGGAACCATTGAACTTCTTTACATGCAGTTATATGCTCCAACAACCTTGGCACCTGGCCGTGACTTCTGGTTGCTGCGCTACACATCTCTTTTGGAGGATGGTAGTCTTGTGGTGTGTGAAAGATCACTTAACAACACTCAGAACGGTCCTGCTATGCCAGCAGTGCAGCATTTTGTTAGAGCAGACATGATGCCAAGTGGGTATCTTATTAGGCCTTGTGAAGGAGGAGGGTCCATTATTCATATTGTTGATCACATAATCTTAGAGCCATGGAGTGTACCTGAAGTTTTGCGTCCACTTTATGAATCGTCAATGCTACTTGCTCAAAGAACAACCATGGCGGCTTTACGGCATTTAAGGCAGATATCTCAAGAAGTTTCTCAGCCAAGTGTGTCAGGATGGGGAAGAAGGCCTGCGGCTCTACGCGCGCTTAGTCAGCGATTGAGCAAGGGATTCAATGAAGCAGTTAATGGTTTTACTGATGATGGGTGGTCCTTGTTGGAGAGTGATGGCATTGATGATGTCACCCTTCTTGTGAACTCATCACCTAGCAAGATGATGGGAGCAAACCTCGGCTACAATGGTGGTGGATTCGCATCTGTCACTAGTTCTGTGCTTTGTGCCAAAGCATCCATGTTGTTGCAGAATGTCCCTCCAGCAATTCTTCTTAGATTCTTGCGGGAGCACCGGTCTGAGTGGGCTGATAGCAGCATTGACGCTTATTCGGCTGCCGCCATCAAAGCTGGTCCCTGTAACTTGCCTGGTGTCCGAGCAGGCGGTTTCGGGGGTCAGGTCATTCTTCCATTGGCTCACACAATTGAGCATGAAGAGTTCATGGAGGTGATTAAGCTTGAAAACATGGGTTACTATAGGGATGATATGACTATACCTGGTGATGTTTTCCTCTTGCAGCTCTGCAGTGGAGTGGATGAGAATGCAGTTGGCACAAGTGCAGAACTCATATTTGCTCCCATTGATGCATCCTTTTCTGATGATGCACCAATTTTACCTTCCGGCTTTCGCATCATACCTCTCGATTCAACCTCGGATGCCGCTAGTCCTAACCGGACGCTTGATCTGGCGTCGGCGCTGGAAGTTGGAACAGCAGGGAGCAAAGCTGGCGGAGAAAACTCAAGCCATTCCGGGAGCACAAAGTCGGTGATGACAATTGCATTTCAGTTTGCATTTGAAGTCCATCTTCAGGACAACATTGCAACCATGGCTAGGCAGTATGTTAGGAGTATCATTGCATCTGTTCAAAGGGTTTCACTAGCCCTTTCGCCGTCCCGATTCGGTTCTCAAAATGCTTTCCATTTGCCTCCTGGTACCCCTGAGGCACAAACACTTGCTAGGTGGATTTCTAGCAGCTATAGATTCTATCTTGGGGTAGAACTGTTGAAGAGTGAGGGCAGTGAACCCATTCTCAAATCTCTTTGGCATCACACTGATGCTGTTTTGTGCTGCTCTCTCAAGGCATTACCTGTTTTCACTTTTGCAAATCAAGCTGGCCTTGACATGCTAGAAACAACTTTGGTTGCACTTCAAGACATCACTCTTGAAAAGATCTTTGATGACAATGGAAAGAAAACTCTGTGCTCTGAGTTCCCCCAGATAATGCAGCAGGGTTTCATGTGTATACAAGGTGGGATATGTTTGTCGAGCATGGGAAGGCCAGTGTCATATGAGAGAGCAGTGGCATGGAAAGTCTTGAATGAAGAAGAAACGGCTCACTGTATCTGCTTCATGTTCATCAATTGGTCCTTTGTCTGA 2532 0.4858 MMAVSSGSKEGGGSKVMMDNGKYVRYTPEQVEALERLYHECPKPSSLRRQQLIRDCPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENTFFRQHTQQNAALATTDTSCESVVTSGQRNLTPQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCPGVAARACGLVGLEPARVAEILKDRLSWYRDCRTVDVLNVMSTGNGGTIELLYMQLYAPTTLAPGRDFWLLRYTSLLEDGSLVVCERSLNNTQNGPAMPAVQHFVRADMMPSGYLIRPCEGGGSIIHIVDHIILEPWSVPEVLRPLYESSMLLAQRTTMAALRHLRQISQEVSQPSVSGWGRRPAALRALSQRLSKGFNEAVNGFTDDGWSLLESDGIDDVTLLVNSSPSKMMGANLGYNGGGFASVTSSVLCAKASMLLQNVPPAILLRFLREHRSEWADSSIDAYSAAAIKAGPCNLPGVRAGGFGGQVILPLAHTIEHEEFMEVIKLENMGYYRDDMTIPGDVFLLQLCSGVDENAVGTSAELIFAPIDASFSDDAPILPSGFRIIPLDSTSDAASPNRTLDLASALEVGTAGSKAGGENSSHSGSTKSVMTIAFQFAFEVHLQDNIATMARQYVRSIIASVQRVSLALSPSRFGSQNAFHLPPGTPEAQTLARWISSSYRFYLGVELLKSEGSEPILKSLWHHTDAVLCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDNGKKTLCSEFPQIMQQGFMCIQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02523 843 ProSiteProfiles START domain profile. 157 385 IPR002913 GO:0008289
Arst10g02523 843 Pfam Homeodomain 22 80 IPR001356 GO:0003677
Arst10g02523 843 ProSiteProfiles 'Homeobox' domain profile. 17 81 IPR001356 GO:0003677
Arst10g02523 843 CDD homeodomain 22 82 IPR001356 GO:0003677
Arst10g02523 843 CDD START_ArGLABRA2_like 161 376 - -
Arst10g02523 843 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 17 843 IPR044830 GO:0003700
Arst10g02523 843 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 17 843 IPR044830 GO:0003700
Arst10g02523 843 Pfam START domain 167 375 IPR002913 GO:0008289
Arst10g02523 843 CDD bZIP 74 113 - -
Arst10g02523 843 Pfam MEKHLA domain 702 842 IPR013978 -
Arst10g02523 843 FunFam Homeobox-leucine zipper protein REVOLUTA 22 77 - -
Arst10g02523 843 SMART HOX_1 19 85 IPR001356 GO:0003677
Arst10g02523 843 SUPERFAMILY Homeodomain-like 21 85 IPR009057 -
Arst10g02523 843 Coils Coil 77 111 - -
Arst10g02523 843 SMART START_1 166 376 IPR002913 GO:0008289
Arst10g02523 843 SUPERFAMILY Bet v1-like 166 377 - -
Arst10g02523 843 Gene3D - 14 88 - -
Arst10g02523 843 Gene3D - 201 382 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02523 Arst-Chr10 88329804 88336475 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02523 11 843 Homeobox Transcription Factor Family AT4G32880 79.809 0.0 1399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Arst10g02523 START 1.1e-51 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02523 K09338 - gmx:100815727 1575.45