Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02500 ATGAGAATAGGGTCCATGGATGCTAATAATAACAACAGCAGTAAGCAACAAGGTCCTCCAAAAGGCGGTGAAATAAGCATGTGGGAGAAGCAAACAACAGCAGTGGTGGTTGCGATTCCAAGCGAGAGCCAAGATTCCAAAGGGGTTACTGAATCTTTGACACCAAAGCATAGCAGTAGAGTTGACTCCCCTCTCACAATGCACAACAACGACAACAATGATGCTGCTTCAGTCTATGGAACCACAAAGTCACCACCTTTGAACTGTGCTTCCCCTGAAATAAGGTTCATGCCAAGCCCTAACAAGCCCCCAAGAATTCCCAATTCAAATGCAAACCTTGTCAGAAGGAAATCACTTTCAAGGTCAGTGTATTCCAAACCCAAATCAAGGTTTGGTGAACAGCCTTATCCCATTGATGGTTCTGTTTTAGATGACAGTAATGTTAGTGGCATTTCAACTTTGCAAGAACAGTTAGCTGGTAACTCACCGTATAGGACCTCATTCAAAGCATCATCGCCTAATAACAAACCTGGGACTGTTAATAGAACAGTTTCCATCACTTCCGTGACTCCCAAGACGCCTTTGATGGCGTCTCCCGGTCCTGCCGGGGAGGATGAGGACGAAATCATTTACAAGAAAGTTGAATTGAGTAAAGAGAAGCGTAAGAGAGTGACCACTATGGTTTTGATTGAATGCTTTGTGTTTGTGTGCCTTGCTGGTACCTTGATAGCTAGCTTGACAGTTGAAAAGCTCAGGGCGACGATGATTTGGGGGTTGGGGATTTGGAGATGGTGCGTTCTTGTGTTGGTGACATTTTGTGGCATGTTAGTTACAAGATGGTTTATGCACCTTGTTGTTTTCTTGATTGAGATGAACTTTCTGTTGAGGAAAAAGGTGCTCTATTTTGTCCATGGACTTAAGAAATCTGTTCAGGTCTTCATTTGGCTCGGTTTAGTTCTTCTCACATGGGTGCTACTAATCAATCGTGGCGTGACACGATCTAAATTAGCCTCGAAAATCTTGGATGGTGTGACATGGACTCTTCTTTCCCTTCTACTTGGAGCATTCTTGTGGTTGATAAAGACATTGCTGCTGAAGATTTTGGCATCGAATTTCCATGTCAAGTCTTTCTTTGATCGGATTCAAGAATCGATATTCCATCAGTACATTTTGCAGACTCTGTCTGGGCCTCCGCTTATAGAAGAAGCTGAGAAGGTTGGGGGATCATTAAGTATTGGTCAATTTAGTTTCAAGAGTACAACAGGTAAAGGTGGCACAAAGAAAGAGGTTATTGATATGGCAAAGCTTCATAAGATGAAACAAGAGAAAGTTTCAGCCTGGACTATGAAGAATTTGATAGATGCTGTGACAAATTCAGGTCTGTCCACGATCTCTAATTCACTAGACGAAAGTTTCGACGATGGAGTGACTGAGCAAACTGATAAAGAGATTACAAATGAGATGGAAGCCACTGCTGCCGCCTATCTCATCTTCAGGAATGTTGCTGCCCCTGGTTGCACGTATATTGATGAGTATGAACTGAGGAGGTTTATGATCAAGGAAGAAGTTGATTTAGTATATCCTCAATTGGCACAAGCAGAGACAGGGCAAATTACCAGAAAGTCATTAGCAGATTGGGTGTTGAAGGTATATCAAGAACGAAAAGCATTGGCACATGCCTTAAGCGATACCAAAACAGCCGTAAGACAATTGAACAAACTTGTGACAGGGATCCTAGTGATTGTGACTATAGTAATTTGGCTTCTACTGATGGAGATTGCAACGACAAAAGTACTTGTTTTCCTCTCTTCGCAGCTAGTACTTGCCGCTTTCATGTTTGGAAATACATGCAAGAACATTTTTGAAGCTATCATCTTCGTGTTTGTGATGCATCCATTTGATGTTGGTGACCGATGCGTTGTAGATGGCGTGGAGTTATTGGTTGAAGAAATGAACATACTGACAACAGTGTTCTTGAAGCTGAATAATGAAAAGGTGTACTATCCAAACTCAGTCCTTGCCATGAAACCAATTAGCAATTATTATAGAAGCCCGGATATGGGTGATGGGGTAGAATTTGCCATCGATTTTTCGACGCCAGCAGAGAAGATCGGTGCACTGAAAGAAAAGATAAAGAGGTACTTGGAGAGGAATCCACAATACTGGCATCCTAATCACGGGTTAGTAGTGAAGGAGATTGAGAATGTGAACAAGATTAAGATGGGTGTGTATGTGGTGCACACAATGAACTTTCAAGAGTTTGGGGAGAAGAACAAGCGAAGAACTGAACTGGTGATTGAATTGAAGAAGATATTAGAAGAGCTAGATATCAGATACAACCTTCTTCCACAAGCTGTTCATGTTAGCCATGTTGAATCAAATACAAGTCCACTCAAGAGATAA 2403 0.4195 MRIGSMDANNNNSSKQQGPPKGGEISMWEKQTTAVVVAIPSESQDSKGVTESLTPKHSSRVDSPLTMHNNDNNDAASVYGTTKSPPLNCASPEIRFMPSPNKPPRIPNSNANLVRRKSLSRSVYSKPKSRFGEQPYPIDGSVLDDSNVSGISTLQEQLAGNSPYRTSFKASSPNNKPGTVNRTVSITSVTPKTPLMASPGPAGEDEDEIIYKKVELSKEKRKRVTTMVLIECFVFVCLAGTLIASLTVEKLRATMIWGLGIWRWCVLVLVTFCGMLVTRWFMHLVVFLIEMNFLLRKKVLYFVHGLKKSVQVFIWLGLVLLTWVLLINRGVTRSKLASKILDGVTWTLLSLLLGAFLWLIKTLLLKILASNFHVKSFFDRIQESIFHQYILQTLSGPPLIEEAEKVGGSLSIGQFSFKSTTGKGGTKKEVIDMAKLHKMKQEKVSAWTMKNLIDAVTNSGLSTISNSLDESFDDGVTEQTDKEITNEMEATAAAYLIFRNVAAPGCTYIDEYELRRFMIKEEVDLVYPQLAQAETGQITRKSLADWVLKVYQERKALAHALSDTKTAVRQLNKLVTGILVIVTIVIWLLLMEIATTKVLVFLSSQLVLAAFMFGNTCKNIFEAIIFVFVMHPFDVGDRCVVDGVELLVEEMNILTTVFLKLNNEKVYYPNSVLAMKPISNYYRSPDMGDGVEFAIDFSTPAEKIGALKEKIKRYLERNPQYWHPNHGLVVKEIENVNKIKMGVYVVHTMNFQEFGEKNKRRTELVIELKKILEELDIRYNLLPQAVHVSHVESNTSPLKR 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02500 800 SUPERFAMILY Sm-like ribonucleoproteins 622 681 IPR010920 -
Arst10g02500 800 MobiDBLite consensus disorder prediction 36 86 - -
Arst10g02500 800 PIRSF Memb_At2g17000 9 799 IPR016688 -
Arst10g02500 800 MobiDBLite consensus disorder prediction 1 20 - -
Arst10g02500 800 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 12 792 IPR016688 -
Arst10g02500 800 MobiDBLite consensus disorder prediction 1 86 - -
Arst10g02500 800 MobiDBLite consensus disorder prediction 119 138 - -
Arst10g02500 800 Gene3D - 632 681 IPR023408 -
Arst10g02500 800 Pfam Mechanosensitive ion channel 573 778 IPR006685 GO:0016020|GO:0055085
Arst10g02500 800 FunFam Predicted mechanosensitive ion channel 632 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02500 Arst-Chr10 87626502 87630069 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02500 61 789 Mechanosensitive Ion Channel Family AT5G12080 59.618 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02500 K22048 - gmx:100803107 1154.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g02500 10 87626502 87630069 Arst10g02500 10 87626502 87630069 ECH