Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02482 ATGACCATGACGACTCAACTCCTCAAGCTCAATCTCTACCCGAAATCCAACATCTCCTTCAACCACGCACCAAATCGTCATGTTCAGTTCCTTCCCCTTCTTCCCACTAATCACCGTCGCAATGACATTCACCGCAACTGCCACCGCCCGGGATTCCTCCGGCCACATTTCCTCGTATCTAACTCCTCGCGCACCGAGATTGCCTCGCCGGAGCCAGCTCAGCTAAAGACTACAGACTCCCCGCTCCTGCTCGACGTCTCCGGTATGATGTGCGGCGCCTGCGTCTCACGAGTCAAGAACATCCTCTCCGCCGATGACCGAGTTGACTCGGTCGTGGTCAACATGTTAACCGAGACCGCCGCCGTCAAGCTCAGGCGGCTCGACGAGGAGAAGGATGTGGAGGAGCCGGCGACGGTTGCGGAGAGCCTGGCCCGGAGGCTGACCGAGTGCGGTTTTCCGACGAAACGAAGGGCGTCGAGTTTGGGAGTTGCAGAGAACGTCAGGAAGTGGAAGGAGCTTGTGAAGAAGAAGGAGGAACTCGTCGCCAAAAGCCGCAGCCGTGTCGCTTTTGCTTGGGCTTTGGTGGCGCTGTGCTGTGGATCTCACGCTTCGCACGTTCTTCATTCTTTGGGGATTCACATTGGTCATGGATCGGTTTTGGAAATTCTTCACAATTCATATGTGAAAGGTGGTATAGCTCTGGGGGCTCTCTTGGGACCAGGACGAGAGTTACTCTTTGATGGCCTAAACGCATTTAGGAAGGGATCACCAAACATGAACTCTCTTGTGGGATTTGGTTCTATAGCTGCTTTTATCATCAGTTCGATATCACTACTGAACCCCGGGTTGGCCTGGGATGCAACATTCTTTGATGAGCCGGTCATGCTTCTTGGTTTTGTGCTTCTTGGACGTTCTTTGGAGGAAAAGGCAAGGATTCAGGCGTCTAGTGATATGAATGAACTCCTTTCATTGATATCTACTCAGTCAAGACTTGTGGTTACTTCATCGGAAGGTTCACCATCTACAGAGAGTGTGCTCGGTTCTAACACAATTTGCGTTGAAGTCCCAACTGATGATATCCGAGTAGGTGACTCAGTGTTGGTGTTGCCTGGAGAGACTATTCCTATAGATGGAAAGGTCATTTCAGGAAGAAGTGTTGTGGATGAATCCATGCTTACTGGAGAATCACTTCCTGTATTTAAAGAGGAAGGCCTCACAGTTTCTGCAGGAACTATAAATTGGGATGGACCTTTAAGGATTGAAGCTTCTTCATCTGGCTCCAACACAATGATATCCAAGATTGTACGCATGGTTGAGGATGCCCAGTCACGTGAAGCACCTGTACAGAGGCTTGCTGATTCCATAGCAGGGCCATTTGTATACAGCGTAATGACTATGTCAGCAGCAACATTTGCATTTTGGTACTATATTGGATCAAACATATTTCCTGATGTTTTGCTCAATGATATTGCGGGCCCAGAAGGGGATCCTTTGGACCTTAACCTTAAAATCTCATTAAAAAGTTTGGTTGTCTCTTGCCCTTGTGCACTGGGTCTTGCCACACCTACAGCGATCCTGGTTGGCACCTCCCTTGGGGCAAGAAAAGGACTTCTTATTAGAGGGGGAGATGTGCTAGAACGCTTGGCCAGTATAAATTATATTGCCCTTGACAAGACCGGAACCCTCACCAAAGGAAAACCAGTTGTCTCCTTGGTTAGCTCTATTAATTATGGAGAATCAGAAATACTTCAGATTGCTGCTGCGGTGGAGAAAACAGCATCTCATCCAATTGCAAAGGCTATTATCAATAAAGCTGAGTCATTAGAGCTGGTCCTTCCAGTTACACAAGGGCAATTGGTAGAACCAGGCTTTGGAACATTGGCAGAAATAGATGGGCGTTTAGTTGCAGTTGGATCTTTAGAATGGGTCCATGATCGCTTCCAGATTAAAATGAACCCCTCTGATTTAGTGAATCTCGAACATACTTTGATGAATCATTCATCAGAGACATCTTCAAACTATTCAAAAACTGTTGTCTATGTTGGACGTGAGGGAGAAGGCATCATTGGTTCTATTACCATATCTGACGTTGTACGTGAAGATGCTCAATCTACCGTAGCAAGACTCAAGCAGAAGGGGATTGAAATGGTCCTGTTATCAGGAGACAGGGAAGAGGCAGTTGCAACTATAGCACAGACAGTTGGGATTGGAAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATTCTCTCTCTCTCTCTATGTATATATATATATATGTTGGTTGGTGATGGGATAAATGATGCACCCTCTTTGGCTGTAGCTGATGTTGGGATTGCTCTACAAAATGAAGCTCAAGAGAACGCTGCCTCTGATGCTGCATCCATTATACTTCTTGGAAACAAAATTTCTCATGTATGA 2421 0.4709 MTMTTQLLKLNLYPKSNISFNHAPNRHVQFLPLLPTNHRRNDIHRNCHRPGFLRPHFLVSNSSRTEIASPEPAQLKTTDSPLLLDVSGMMCGACVSRVKNILSADDRVDSVVVNMLTETAAVKLRRLDEEKDVEEPATVAESLARRLTECGFPTKRRASSLGVAENVRKWKELVKKKEELVAKSRSRVAFAWALVALCCGSHASHVLHSLGIHIGHGSVLEILHNSYVKGGIALGALLGPGRELLFDGLNAFRKGSPNMNSLVGFGSIAAFIISSISLLNPGLAWDATFFDEPVMLLGFVLLGRSLEEKARIQASSDMNELLSLISTQSRLVVTSSEGSPSTESVLGSNTICVEVPTDDIRVGDSVLVLPGETIPIDGKVISGRSVVDESMLTGESLPVFKEEGLTVSAGTINWDGPLRIEASSSGSNTMISKIVRMVEDAQSREAPVQRLADSIAGPFVYSVMTMSAATFAFWYYIGSNIFPDVLLNDIAGPEGDPLDLNLKISLKSLVVSCPCALGLATPTAILVGTSLGARKGLLIRGGDVLERLASINYIALDKTGTLTKGKPVVSLVSSINYGESEILQIAAAVEKTASHPIAKAIINKAESLELVLPVTQGQLVEPGFGTLAEIDGRLVAVGSLEWVHDRFQIKMNPSDLVNLEHTLMNHSSETSSNYSKTVVYVGREGEGIIGSITISDVVREDAQSTVARLKQKGIEMVLLSGDREEAVATIAQTVGIGSSLSLSLSLSLILSLSLCIYIYMLVGDGINDAPSLAVADVGIALQNEAQENAASDAASIILLGNKISHV 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02482 806 CDD P-type_ATPase_HM 187 806 - -
Arst10g02482 806 ProSitePatterns E1-E2 ATPases phosphorylation site. 557 563 IPR018303 -
Arst10g02482 806 Gene3D - 311 442 - -
Arst10g02482 806 FunFam Copper-transporting ATPase PAA2, chloroplastic 566 698 - -
Arst10g02482 806 Pfam Heavy-metal-associated domain 84 152 IPR006121 GO:0046872
Arst10g02482 806 CDD HMA 84 153 IPR006121 GO:0046872
Arst10g02482 806 Gene3D - 546 806 IPR023214 -
Arst10g02482 806 NCBIfam heavy metal translocating P-type ATPase 259 806 IPR027256 GO:0006812|GO:0016020|GO:0019829
Arst10g02482 806 Gene3D - 566 698 IPR023299 GO:0000166
Arst10g02482 806 PANTHER ATP7, ISOFORM B 74 806 - -
Arst10g02482 806 SUPERFAMILY Calcium ATPase, transmembrane domain M 291 549 IPR023298 -
Arst10g02482 806 SUPERFAMILY Calcium ATPase, transduction domain A 349 438 IPR008250 -
Arst10g02482 806 SUPERFAMILY HMA, heavy metal-associated domain 83 124 IPR036163 GO:0046872
Arst10g02482 806 PRINTS P-type cation-transporting ATPase superfamily signature 690 701 - -
Arst10g02482 806 PRINTS P-type cation-transporting ATPase superfamily signature 712 722 - -
Arst10g02482 806 PRINTS P-type cation-transporting ATPase superfamily signature 388 402 - -
Arst10g02482 806 PRINTS P-type cation-transporting ATPase superfamily signature 555 569 - -
Arst10g02482 806 PRINTS P-type cation-transporting ATPase superfamily signature 762 781 - -
Arst10g02482 806 Gene3D - 75 158 - -
Arst10g02482 806 ProSiteProfiles Heavy-metal-associated domain profile. 80 155 IPR006121 GO:0046872
Arst10g02482 806 FunFam Copper-transporting ATPase 1, putative 311 442 - -
Arst10g02482 806 Pfam E1-E2 ATPase 340 535 - -
Arst10g02482 806 SUPERFAMILY HAD-like 543 802 IPR036412 -
Arst10g02482 806 Pfam haloacid dehalogenase-like hydrolase 551 776 - -
Arst10g02482 806 NCBIfam HAD-IC family P-type ATPase 349 785 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02482 Arst-Chr10 86930621 86939797 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02482 250 806 Primary Pumps ATPases AT1G63440 34.326 8.21e-84 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02482 K17686 - gmx:100127402 1202.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g02482 10 86930621 86939797 Arst10g02482 10 86930621 86939797 ECH