Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02461 ATGGGTAGTGGTAATGGTAGAGTTGATGTTGTGAGTGGCAAGGGATGCTCAAGGCTGTTTTCATCTTCGTTCAGAGCTTTGCAGCCATTGGAGCCAATGTCTTCTGTTTCGTCCTCCCCACATATTCGATCAAATGCTCCTTTTGCTGGTCTTGTTATATGCGTTACTGGGCTATCCAAAGAAGCAAGGAATCAAGTCATGGAGGCAACAGAAAGATTAGGTGGCCAGTATAGCCCCAATTTGCATCCACAGTGTACCCATTTGGTGGTTCAGAGCTTTGGAGGACGCAAGTTTGAGCATGCGCTGAAGCATGGAGCAAAAAACGGTCTCTTTGCTGTCACACTGGGTTGGTTCGTGGACAGTGTCAGGAAAAATGTGAGGTTGAGTGAGTCCCATTACAGTCTGAAGAGTAATGTGGACAATAACACACGCTTGGATGACTTTAAACTGCTTCCTGGGTATACCGGTGCCGAAAATTCTTGTCTTCCAGCAAGTCTACGTGAGACCAAGAACGTTGATAATGTTGAAGAATTTCAAAGATCTTCTGGTAGAAAATCTAATAGAAGTGTGGACTTCACTTTATCTGGTTACTCCATCTATATTGATCCTGGAATTTCATGTGAATTGAGGAACAAGGTTGTTGATACTGCCACAAGAGAAGGTGCTAGTCTGGCGGAACGATGGTTTGTTGGCTGCAATGTTAGTCATGTAGTGACTGAAGGGACATTTGTACAAAGATATCTTGGATATTCAAGTAACCTCATCACACCACTGTGGATTCTCAAAACAGCCAAGGAGAAATATGCACAAAGGCTTGTTCATATGTCTGCTGATTTGGCAAAGCAAGTTGGGTTGATGCTTGAAGACATTCATAATGGCATTTTAAGGGAGGAAATAAAGAAGCAAAAAGACAATGAAGTTCATCAGGGCAGTGAAAGTGAATATAGTTACCACGAGAGGCAACAAATAGTGAATGCTGCAAAAATTGGTGTAAGAAGTCGCCGTGGTAGGCAAATGCAGACTTGTCAGACTCCAATTCGTCCTATAACTCCTAACAACCTTCTAGACTCTATCTGCTGGTCTATATCCGAGCCAACTTCAGCTGCTTCCATCTATACAGATTCTTTCAGTGTTGAAGATCATACTGAAAATCATAATACTTCAATATTTCTTGGTGCAAAAGGGGATGGCAAGGACTCAGAAGCTTCATTTTCAAACTCCACTCGTCATCTGACCGAAAGCGAGAAATCAGAGTTGATATTTAAAAACCATTTTCTCACCATACTGTTCCCAATCGACCGATTTGCCGAGATGGGTCCTTCTTCACAAACATACTTCAGCCATAATGGTTTTACATGTCTTCAGGTGTTGGATCATATCCATGCATTTTATCAGGAGAATATGTCAAACCAAGAAATAGAAGCTGCAATTCATACCGATTCAAGACATGCTGATAGGCTTAGATCAGTGTACCGCAGTAAAGAAACTGCAGAGCGTGGCTTTGTGTTGTTCAAACGCATTGAATTTTTAGGAAGTCGCACTAGTTTTGAAATGTTGAAGCGTGTAACTGGGGACAACAACTCCAATGTGTATGAGCTATTACTTAGGGCTTAA 1614 0.4195 MGSGNGRVDVVSGKGCSRLFSSSFRALQPLEPMSSVSSSPHIRSNAPFAGLVICVTGLSKEARNQVMEATERLGGQYSPNLHPQCTHLVVQSFGGRKFEHALKHGAKNGLFAVTLGWFVDSVRKNVRLSESHYSLKSNVDNNTRLDDFKLLPGYTGAENSCLPASLRETKNVDNVEEFQRSSGRKSNRSVDFTLSGYSIYIDPGISCELRNKVVDTATREGASLAERWFVGCNVSHVVTEGTFVQRYLGYSSNLITPLWILKTAKEKYAQRLVHMSADLAKQVGLMLEDIHNGILREEIKKQKDNEVHQGSESEYSYHERQQIVNAAKIGVRSRRGRQMQTCQTPIRPITPNNLLDSICWSISEPTSAASIYTDSFSVEDHTENHNTSIFLGAKGDGKDSEASFSNSTRHLTESEKSELIFKNHFLTILFPIDRFAEMGPSSQTYFSHNGFTCLQVLDHIHAFYQENMSNQEIEAAIHTDSRHADRLRSVYRSKETAERGFVLFKRIEFLGSRTSFEMLKRVTGDNNSNVYELLLRA 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02461 537 ProSiteProfiles BRCT domain profile. 43 135 IPR001357 -
Arst10g02461 537 SUPERFAMILY BRCT domain 33 136 IPR036420 -
Arst10g02461 537 CDD BRCT_TopBP1_rpt2_like 47 125 - -
Arst10g02461 537 Pfam Family of unknown function (DUF6699) 441 521 IPR046522 -
Arst10g02461 537 PANTHER BRCT DOMAIN DNA REPAIR PROTEIN-RELATED 3 537 - -
Arst10g02461 537 Gene3D BRCT domain 46 137 IPR036420 -
Arst10g02461 537 SMART BRCT_7 45 125 IPR001357 -
Arst10g02461 537 SMART BRCT_7 191 267 IPR001357 -
Arst10g02461 537 Pfam twin BRCT domain 51 105 IPR001357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02461 Arst-Chr10 86306560 86311706 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02461 47 139 Core DNA Replication Machinery Family AT1G77320 35.484 3.35e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02461 - - gmx:100815253 869.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g02461 10 86306560 86311706 Arst10g02461 10 86306560 86311706 ECH