Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02460 ATGATCCCGAGCAACAACACACGAAGAGCTTTGCAGCCATTGGAGCCAATGTCTTCTGTTTCGTCCTCCCCACATATTCGATCAAATGCTCCTTTTGCTGGTCTTGTTATATGCGTTACTGGGCTATCCAAAGAAGCAAGGAATCAAGTCATGGAGGCAACAGAAAGATTAGGTGGCCAGTATAGCCCCAATTTGCATCCACAGTGTACCCATTTGGTGGTTCAGAGCTTTGGAGGACGCAAGTTTGAGCATGCGCTGAAGCATGGAGCAAAAAACGGTCTCTTTGCTGTCACACTGGGTTGGTTCGTGGACAGTGTCAGGAAAAATGTGAGGTTGAGTGAGTCCCATTACAGTCTGAAGAGTAATGTGGACAATAACACACGCTTGGATGACTTTAAACTGCTTCCTGGGTATACCGGTGCCGAAAATTCTTGTCTTCCAGCAAGTCTACGTGAGACCAAGAACGTTGATAATGTTGAAGAATTTCAAAGATCTTCTGGTAGAAAATCTAATAGAAGTGTGGACTTCACTTTATCTGGTTACTCCATCTATATTGATCCTGGAATTTCATGTGAATTGAGGAACAAGGTTGTTGATACTGCCACAAGAGAAGGTGCTAGTCTGGCGGAACGATGGTTTGTTGGCTGCAATGTTAGTCATGTAGTGACTGAAGGGACATTTGTACAAAGATATCTTGGATATTCAAGTAACCTCATCACACCACTGTGGATTCTCAAAACAGCCAAGGAGAAATATGCACAAAGGCTTGTTCATATGTCTGCTGATTTGGCAAAGCAAGTTGGGTTGATGCTTGAAGACATTCATAATGGCATTTTAAGGGAGGAAATAAAGAAGCAAAAAGACAATGAAGTTCATCAGGGCAGTGAAAGTGAATATAGTTACCACGAGAGGCAACAAATAGTGAATGCTGCAAAAATTGGTGTAAGAAGTCGCCGTGGTAGGCAAATGCAGACTTGTCAGACTCCAATTCGTCCTATAACTCCTAACAACCTTCTAGACTCTATCTGCTGGTCTATATCCGAGCCAACTTCAGCTGCTTCCATCTATACAGATTCTTTCAGTGTTGAAGATCATACTGAAAATCATAATACTTCAATATTTCTTGGTGCAAAAGGGGATGGCAAGGACTCAGAAGCTTCATTTTCAAACTCCACTCGTCATCTGACCGAAAGCGAGAAATCAGAGTTGATATTTAAAAACCATTTTCTCACCATACTGTTCCCAATCGACCGATTTGCCGAGATGGGTCCTTCTTCACAAACATACTTCAGCCATAATGGTTTTACATGTCTTCAGGTGTTGGATCATATCCATGCATTTTATCAGGAGAATATGTCAAACCAAGAAATAGAAGCTGCAATTCATACCGATTCAAGACATGCTGATAGGCTTAGATCAGTGTACCGCAGTAAAGAAACTGCAGAGCGTGGCTTTGTGTTGTTCAAACGCATTGAATTTTTAGGAAGTCGCACTAGTTTTGAAATGTTGAAGCGTGTAACTGGGGACAACAACTCCAATGTGTATGAGCTATTACTTAGGGCTTAA 1566 0.4189 MIPSNNTRRALQPLEPMSSVSSSPHIRSNAPFAGLVICVTGLSKEARNQVMEATERLGGQYSPNLHPQCTHLVVQSFGGRKFEHALKHGAKNGLFAVTLGWFVDSVRKNVRLSESHYSLKSNVDNNTRLDDFKLLPGYTGAENSCLPASLRETKNVDNVEEFQRSSGRKSNRSVDFTLSGYSIYIDPGISCELRNKVVDTATREGASLAERWFVGCNVSHVVTEGTFVQRYLGYSSNLITPLWILKTAKEKYAQRLVHMSADLAKQVGLMLEDIHNGILREEIKKQKDNEVHQGSESEYSYHERQQIVNAAKIGVRSRRGRQMQTCQTPIRPITPNNLLDSICWSISEPTSAASIYTDSFSVEDHTENHNTSIFLGAKGDGKDSEASFSNSTRHLTESEKSELIFKNHFLTILFPIDRFAEMGPSSQTYFSHNGFTCLQVLDHIHAFYQENMSNQEIEAAIHTDSRHADRLRSVYRSKETAERGFVLFKRIEFLGSRTSFEMLKRVTGDNNSNVYELLLRA 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02460 521 ProSiteProfiles BRCT domain profile. 27 119 IPR001357 -
Arst10g02460 521 SUPERFAMILY BRCT domain 26 120 IPR036420 -
Arst10g02460 521 CDD BRCT_TopBP1_rpt2_like 31 109 - -
Arst10g02460 521 Gene3D BRCT domain 30 121 IPR036420 -
Arst10g02460 521 Pfam twin BRCT domain 35 89 IPR001357 -
Arst10g02460 521 MobiDBLite consensus disorder prediction 1 25 - -
Arst10g02460 521 PANTHER BRCT DOMAIN DNA REPAIR PROTEIN-RELATED 19 521 - -
Arst10g02460 521 SMART BRCT_7 29 109 IPR001357 -
Arst10g02460 521 SMART BRCT_7 175 251 IPR001357 -
Arst10g02460 521 Pfam Family of unknown function (DUF6699) 425 505 IPR046522 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02460 Arst-Chr10 86306559 86311706 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02460 31 123 Core DNA Replication Machinery Family AT1G77320 35.484 3.06e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02460 - - gmx:100815253 836.639