Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02438 ATGGTGTGTGAGAAGGAGAGGGAGTGCATTGAGGACATGGAAATTGAAATCCTGCCTTCAATGTGGCCTGAAGATATTGGAAGTGAAGTTGGAAAGCAGTTCAATATCGAAAAGCCTGGAAGGGAGCAGGATATGTTAGAAGATGTTACAATCATAGAGGAGCCAACTATAGCCGATTTCAAGCGCCTCATGGAGCTTACAAATTTCACTGAAAAAGGGTCTTCTCAGTTGGCATACCTCATGAAACATTGGGAGTACAAGCAGGCAAACGCGGTGCGCCTTCTGAGGGAAGAGCTCGACAACCTTAGCAAACAAAGGCAGGATGTTGAGCTAAGGAAGCTGGAGATATTGGAGGAGCACCGGTTCGAGGGAGAAAGATATGGAGGCGACAAAAGGCCGGTGTCTATATTGGAGGATGTTTATGACATATGGCAGGACATGCCGCGAAGGAAGAACAAGGTTGTGCTTCAGAACAAGAGAATTGACATAGATGCTGCTGAGTATGATACTGTTAAGTATTGGAAACAAAGGGCCTTGCGTTTGGAGAAATTGCTTGAGGCAAGCATCCAGAGAGAGCAGATACTCCAAGACAAGTTGCTTGAAAGGATCAACAACATTGAGAGGCAATCCTCACCTGTAGAAGAACTCTCCCAGATTCTCAAAAGAGCAGATAATTTCTTGCATTTCATCCTCCAGAATGCACCTGTTGTTATTGGCCATCAGGACAAGGAATTGCGATACCGGTTTATCTATAATCATTTTCCAAGTTTGCAAGAGGAGGACATAATAGGAAAAACAGATGTGGAAATATTCACAGGATCTGGGGTCAAAGAATCTCAAGAGTTCAAGAGAGAAGTCTTGGAGAAAGGATTACCTGCAAAAAGGGAAATCACTTTTGAGACAGAACTATTCGGATCAAAGACATTCTTGATATATGTAGAACCCGTGTTTAGCAAAGTAGGGGAGACAATTGGAATAAACTATATGGGAATGGATGTAACAGATCAGGTGCGGAAAAGAGAAAGGATGGCGAAGATTCGGGAAGAGATTGCAGTTCAGAAGGCAAAGGAAACAGAACTAAACAAAACCATTCACATTACAGAGGAGACTATGAGAGCAAAACAAATGCTGGCCACAATGTCTCATGAGATAAGGTCTCCATTATCTGGGGTAGTTAGCATGGCTGAAGTTCTTTCTACCACAAAGCTTGATGGGGAGCAAAGACAGCTCTTGGATGTTATGCTATCTTCAGGAGATTTGGTTCTTCAACTTATAAATGACATTCTTGATCTTTCCAAGGTTGAATCAGGAGTTATGAAGCTCGAGGCAACTAAATTTCGGCCACGAGAGGTAGTAAAGCACGTACTCCAGACGGCTGCAGCGTCGTTGCAGAAAATATTAACCTTAGAAGGACATGTGTCAGATGATGTACCAATTGAGGTTATTGGTGATGTTTTAAGGCTCCGGCAAATTCTTACAAATTTGATCAGCAATGCGATCAAGTTTACACATGAAGGGAAAGTAGGTATAAACCTATATGTTGTTTCAAATATTTCAGCAACTCAAGCAAATGAAGATAGATACCTCTCAACACCTCAAAGTAGCAGTGACCGAAATCTTCTTGATGATCAGAGACATGATCACCCTCAAGGCCAAAACCATGCATTTCATGGTGAATGCGGATCACCAATTAAAAGTGAATTCTCAGTAAATGAAGACACCGAGGAGCATCATCATTTGACAGAGACAATGGTGTGGATACGCTGTGATGTGTATGACACAGGCATTGGCATACCAGAAAATGCAATACCTACTTTATTTAAAAGGTACATGCAAGTTGGCACAGATCATGCTCGAAAGTATGGTGGCACAGGACTAGGATTAGCAATATGCAAACAGCTGGTTGAGTTGATGGGGGGTCATCTAACAGTGTCTAGCAAAGAACACCATGGTTCTACCTTCACATTCATACTTCCCTACAAGGTTTCAATAATTGAAGAAAATTCTGATGACACAGATGAACTCTCTGATATGGAGAATGATGAAGGTGCTTGTGATTATACAACAGAAAGTTTCTTCCAATTCCAACCGCGAACTTTAGGCTCTCTTTTCTCTTCCAATGGTTCTAGCAGAGCACACAAGTTATTAACACATAAGATTGGCTACACAAGCTCACATACTTCAGAGTGTTCATTCTCATTCCCATTCCCATTTCATGATATCATATCAAAAGGGACATGTTCTGTTCAGGATTCATCTTTAGTTGTTGATGCTCCAGAGATATCAGAATCATCAGCAAGTTCATCCGGTCAGAGCCGAGAAACAAAGATCGAAAATATAGTTAGCAGTGATAAATATTGTCAAGATAAGGGTATTACAGATTCTTCTAAACATATGGTGGAAGGTTCAGAAATGGATATAGCAACAAAGCCAAGTGAACTTCAGAAAACATGTAAGGTTCAAGGGAATGCAAACATGACAACTCAATGTGTTACTAGCATCTGTGCATCAGAATTAACCAGATCCACATCAAAGCCTAAGATCCTTCTGGTTGAAGATAGCAAGATTAATGTCATGGTGACACAATCCATGATGAAGCAGTTAGGCCATAGCATAGATGTTGTGAATAATGGAGCCGAAGCAGTGCGTGCCGTTCAGCGCTGCTCTTATGACCTGGTTTTGATGGATGTTTGCATGCCAATAATGAATGGCCTTCAGGCAACGAAATTGATCCGGTCTTTCGAGGAAACAGGAAATTGGGATGCTGCAAGAAAAGTTTTAATGGAGTTAAATCTACCAGATCTAGATCATGAATGTTCTGGACCATCTAAAAAGCGAATCCCAATTGTCGCGATGACCAATATCTAA 2868 0.4139 MVCEKERECIEDMEIEILPSMWPEDIGSEVGKQFNIEKPGREQDMLEDVTIIEEPTIADFKRLMELTNFTEKGSSQLAYLMKHWEYKQANAVRLLREELDNLSKQRQDVELRKLEILEEHRFEGERYGGDKRPVSILEDVYDIWQDMPRRKNKVVLQNKRIDIDAAEYDTVKYWKQRALRLEKLLEASIQREQILQDKLLERINNIERQSSPVEELSQILKRADNFLHFILQNAPVVIGHQDKELRYRFIYNHFPSLQEEDIIGKTDVEIFTGSGVKESQEFKREVLEKGLPAKREITFETELFGSKTFLIYVEPVFSKVGETIGINYMGMDVTDQVRKRERMAKIREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLSGVVSMAEVLSTTKLDGEQRQLLDVMLSSGDLVLQLINDILDLSKVESGVMKLEATKFRPREVVKHVLQTAAASLQKILTLEGHVSDDVPIEVIGDVLRLRQILTNLISNAIKFTHEGKVGINLYVVSNISATQANEDRYLSTPQSSSDRNLLDDQRHDHPQGQNHAFHGECGSPIKSEFSVNEDTEEHHHLTETMVWIRCDVYDTGIGIPENAIPTLFKRYMQVGTDHARKYGGTGLGLAICKQLVELMGGHLTVSSKEHHGSTFTFILPYKVSIIEENSDDTDELSDMENDEGACDYTTESFFQFQPRTLGSLFSSNGSSRAHKLLTHKIGYTSSHTSECSFSFPFPFHDIISKGTCSVQDSSLVVDAPEISESSASSSGQSRETKIENIVSSDKYCQDKGITDSSKHMVEGSEMDIATKPSELQKTCKVQGNANMTTQCVTSICASELTRSTSKPKILLVEDSKINVMVTQSMMKQLGHSIDVVNNGAEAVRAVQRCSYDLVLMDVCMPIMNGLQATKLIRSFEETGNWDAARKVLMELNLPDLDHECSGPSKKRIPIVAMTNI 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02438 955 SMART HKATPase_4 483 662 IPR003594 -
Arst10g02438 955 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 51 953 - -
Arst10g02438 955 Coils Coil 92 119 - -
Arst10g02438 955 CDD REC_hyHK_CKI1_RcsC-like 848 953 - -
Arst10g02438 955 MobiDBLite consensus disorder prediction 526 559 - -
Arst10g02438 955 MobiDBLite consensus disorder prediction 539 553 - -
Arst10g02438 955 SUPERFAMILY CheY-like 844 917 IPR011006 -
Arst10g02438 955 ProSiteProfiles Histidine kinase domain profile. 379 662 IPR005467 -
Arst10g02438 955 Gene3D PAS domain 207 336 - -
Arst10g02438 955 Pfam His Kinase A (phospho-acceptor) domain 374 437 IPR003661 GO:0000155|GO:0007165
Arst10g02438 955 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 483 660 IPR003594 -
Arst10g02438 955 FunFam Putative histidine kinase 5 360 437 - -
Arst10g02438 955 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 371 437 IPR036097 GO:0000155|GO:0007165
Arst10g02438 955 Gene3D - 436 665 IPR036890 -
Arst10g02438 955 Coils Coil 189 209 - -
Arst10g02438 955 Gene3D - 337 435 - -
Arst10g02438 955 CDD HATPase_EvgS-ArcB-TorS-like 488 659 - -
Arst10g02438 955 Pfam Response regulator receiver domain 848 915 IPR001789 GO:0000160
Arst10g02438 955 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 426 660 IPR036890 -
Arst10g02438 955 FunFam Histidine kinase 5 214 349 - -
Arst10g02438 955 SMART HisKA_10 372 437 IPR003661 GO:0000155|GO:0007165
Arst10g02438 955 ProSiteProfiles Response regulatory domain profile. 847 955 IPR001789 GO:0000160
Arst10g02438 955 CDD HisKA 374 433 IPR003661 GO:0000155|GO:0007165
Arst10g02438 955 Gene3D - 840 955 - -
Arst10g02438 955 SMART REC_2 846 939 IPR001789 GO:0000160
Arst10g02438 955 PRINTS Bacterial sensor protein C-terminal signature 622 640 IPR004358 GO:0016310|GO:0016772
Arst10g02438 955 PRINTS Bacterial sensor protein C-terminal signature 646 659 IPR004358 GO:0016310|GO:0016772
Arst10g02438 955 PRINTS Bacterial sensor protein C-terminal signature 587 601 IPR004358 GO:0016310|GO:0016772
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02438 Arst-Chr10 85732344 85737398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02438 1 953 Histidine Kinase Gene Family AT5G10720 56.269 0.0 1028
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Arst10g02438 HATPase_c 1.4e-28 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02438 - - gmx:100819520 1449.88