Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02436 ATGATGAAAGGGATGAAGCATATTATTATTGTGATTGTTATTATGGGTTTTATGTTGTTGTGGCCTTGTCCATCATCAGCAGAGAAGACAGTGATTAATGTTGGAGTAGTGCTTGATCTTAGTGAAACAGTGGGGAAGATTGGATTGAGTTGCATCAACATGTCCCTTTCGGATTTCTATGATGCTCATCCTCATTACAACACCAGGATGCTCCTCCATGTCAGAGACTCTCAAACTGATGTGGTTACCGCTGCTTCTGCAGAGTTGATGAAAAAGGAGAAAGTGGAAGCAATAATGGGACCAGTAACATCAATGCAAGCAAGCTTTGTTGTGAATCTTGGAGACAAAGCTCACGTTCCAATCATATCCTTCACCGCAACAAGCCCTTCTTTAACTTCGCTTGGCAGTTCCTACTTCTTTCGAATTGCACAAAATGATTCTACTCAAGTACACGCCATAAGCGACATCATCCAATCCTTCGGCTGGAGACAAGCAGTTCCTATCTACATCGACAACGACTATGGCCGCGCCATTATTCCCTTCTTAACCAATTCCCTTCAACAAGCAAATATCAGGGTCCCATACCTCGCTGTTATTCCTCCCTCCGCCACCGCCGATCACATTGAAGAAGAGCTTTACAAGCTTATGACCATGGAAACTAGGGTTTTTGTTGTTCATATGGTGCGGAATCCTGGGTCCACTCTCTTTGCCATTGCGGATCGGATTGGAATGATGAAACAAGGCTATGTTTGGATTGTAACCAATGGTATGGCTAATACTTTGGCCTCTCTTGACGCCTCGGATATTCAAGTGATGCAAGGTGTGTTAGGAGTGAAAACATATGTTCCCAAAACCAAAAGGGTTGTTGATTTCCAAGCACGTTGGAAGAGGCGTTTCTTGCAGGACAATCCAGCCATGGTTGATGCAAGCATCAATGTGTTTGGATTATGGGCTTATGATGCCTCAACCGCGCTCGCAAGCGCGGTTGAGAGGGCTAATAATAATAATAATTCAAAACCCGGATTTCGAAACACCACAAATAATGCTTCCAGAAATTTCAGTGAGATTGACAATATAGGAGTGTCTCAGAGGGGTGAAGAATTGCGGGATGCTTTATCGGACACCAGATTCAGCGGCCTGGCCGGCCAATTCGGCCTTGTCAATGGAGAATTAGAAGCTGCAACTTTTCAGATAATTAACGTAAATGGTAATGGAGAAAAGGTGATAGGATTTTGGACACCACAGAAGAGATTAACAAGAAATCTTAGCAGCCTAATAAAAAGTAGTACAACTGATTTGAATAATAATCATGATAATGTTCTAGGAGCAATGATATGGCCAGGGGATAGTTATTCAGTTCCAAAGGGGTGGGAGATACCAACCAATGGGAAGAAACTGAGGATTGGAGTTCCGGTGTCATCAAGGCCTCAATTTGTGAAGGTGGAAAATGATGGTGAAACTAACACAACAAAGGTAACTGGTTTTAGCATTGATGTGTTTGAAGCGGTGGTGCAAGCTTTGCCTTATGCTTTGCCATACCAATTCATTCCTTTTGCAAAACCCAATGGGGAGAGCGCCGGCACCTATGATGATTTAATCATGCAGGTCTATTTTGGGGTGTTTGATGCTGTGGTGGCAGACACAACCATCATAGCAAACAGGTCAAAGTACGTTGACTTCACGTTGCCGTATACAGAGTCAGGAGTATCAATGGTGGTGCCAGTGAAAGATAAGAGCAAGAAGGGTGCATGGGTGTTCCTAAAGCCTCTCACCTGGGATCTATGGATGACCACTGGTTGTTCCTTCGTGTTCTTTGGATTCGTAGTGTGGGTTCTTGAGCACCGCATCAACAAAGATTTTCGTGGCCCTCCTTCTCACCAGATCGGCACCAGTTTGTGGTTTTCTTTCTCCACCATGGTCTTTGCTCATCGAGAAAAAGTAGTGAGCAACACTGCACGGTTTGTTGTGATAATATGGGTATTTGTGGTGCTGATTTTGACTCAGAGTTACACAGCAAATTTGTCATCACTACTAACGGTGGAGCAACTTCGACCAACCGTGACCAATGTAAATGATCTAATAAAGTATAGAACACCTGTTGGGTACCATACAGGTTCTTTTGTTCGTGGGATCTTGCTCAACCTTGGTTTCAAGGATTTTCAGCTCATAACTTATAATTCCACAGCACAATGTGATGATCTTCTCAGCAGAGGCAGTCAAAACGGTGGAATTGCTGCTGCATTTGATGAAATTCCATACATTAGGATTCTTCTTGGAACCTATTGCTCTAAGTATACCATGGTGGACCCCACATTTAAAACCGATGGCTTTGGCTTTGTATTCCCAAAAAGTTCTCCTCTGGTGGGTGATGTATCAAGGGCAATTCTGAAAGTAACTGAAGATCCAAGAATGAAAGAAATAGAGAATGCATGGTTTGAGAAGCGAAGTAGTTGCCAGCAAGAAGATGCATCAGTGTCTTCTTCTAATAGTCTTGGCCTAGACAGCTTCTGGGGCCTATTTCTCATTGCTGCATTGGCCTCCACTTCAGCACTCCTCATCTTTGCAGTTACATTCTTGTATGATCATAGACATCAATGGTGGTTCATCAATAATGATTATTCAACATGGACGACCCGAATCCGCATCTTGCTGAGAATCTTCGACCAGAGAGACCCTAGGTCTCAAAGATTCAGGAGAGGTGGTACTGATTCAGTTAAGGAACAAGATAAAGACAATTATGATCAAAGTAGCAGCACCATTGGTCGTCATCATCATCATCATCATGATCATAGCTTAGATGCTGCTTCCACCTACACAGAATACAGCTTCTCCTTTCAAGGATCACCTTGTGAAGACAGCAATAGTGATAATAGTAATGTAGAGCAAAATAATTTGCATAGTCAACCATCTCAACAAGAAAACTGA 2925 0.4294 MMKGMKHIIIVIVIMGFMLLWPCPSSAEKTVINVGVVLDLSETVGKIGLSCINMSLSDFYDAHPHYNTRMLLHVRDSQTDVVTAASAELMKKEKVEAIMGPVTSMQASFVVNLGDKAHVPIISFTATSPSLTSLGSSYFFRIAQNDSTQVHAISDIIQSFGWRQAVPIYIDNDYGRAIIPFLTNSLQQANIRVPYLAVIPPSATADHIEEELYKLMTMETRVFVVHMVRNPGSTLFAIADRIGMMKQGYVWIVTNGMANTLASLDASDIQVMQGVLGVKTYVPKTKRVVDFQARWKRRFLQDNPAMVDASINVFGLWAYDASTALASAVERANNNNNSKPGFRNTTNNASRNFSEIDNIGVSQRGEELRDALSDTRFSGLAGQFGLVNGELEAATFQIINVNGNGEKVIGFWTPQKRLTRNLSSLIKSSTTDLNNNHDNVLGAMIWPGDSYSVPKGWEIPTNGKKLRIGVPVSSRPQFVKVENDGETNTTKVTGFSIDVFEAVVQALPYALPYQFIPFAKPNGESAGTYDDLIMQVYFGVFDAVVADTTIIANRSKYVDFTLPYTESGVSMVVPVKDKSKKGAWVFLKPLTWDLWMTTGCSFVFFGFVVWVLEHRINKDFRGPPSHQIGTSLWFSFSTMVFAHREKVVSNTARFVVIIWVFVVLILTQSYTANLSSLLTVEQLRPTVTNVNDLIKYRTPVGYHTGSFVRGILLNLGFKDFQLITYNSTAQCDDLLSRGSQNGGIAAAFDEIPYIRILLGTYCSKYTMVDPTFKTDGFGFVFPKSSPLVGDVSRAILKVTEDPRMKEIENAWFEKRSSCQQEDASVSSSNSLGLDSFWGLFLIAALASTSALLIFAVTFLYDHRHQWWFINNDYSTWTTRIRILLRIFDQRDPRSQRFRRGGTDSVKEQDKDNYDQSSSTIGRHHHHHHDHSLDAASTYTEYSFSFQGSPCEDSNSDNSNVEQNNLHSQPSQQEN 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02436 974 SUPERFAMILY Periplasmic binding protein-like II 441 813 - -
Arst10g02436 974 CDD GluR_Plant 464 812 - -
Arst10g02436 974 FunFam Glutamate receptor 583 713 - -
Arst10g02436 974 Pfam Ligand-gated ion channel 814 846 IPR001320 GO:0015276|GO:0016020
Arst10g02436 974 MobiDBLite consensus disorder prediction 895 920 - -
Arst10g02436 974 Pfam Bacterial extracellular solute-binding proteins, family 3 488 813 IPR001638 -
Arst10g02436 974 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 33 918 IPR015683 -
Arst10g02436 974 Pfam Receptor family ligand binding region 51 404 IPR001828 -
Arst10g02436 974 Gene3D - 345 466 - -
Arst10g02436 974 Gene3D - 147 312 - -
Arst10g02436 974 FunFam Glutamate receptor 149 309 - -
Arst10g02436 974 PIRSF IGluLR_plant 2 948 IPR017103 -
Arst10g02436 974 Gene3D - 763 820 - -
Arst10g02436 974 PIRSF IGluLR_plant 2 948 IPR017103 -
Arst10g02436 974 CDD PBP1_GABAb_receptor_plant 33 422 IPR044440 -
Arst10g02436 974 Gene3D - 467 582 - -
Arst10g02436 974 MobiDBLite consensus disorder prediction 895 931 - -
Arst10g02436 974 FunFam Glutamate receptor 2.7 720 820 - -
Arst10g02436 974 SUPERFAMILY Periplasmic binding protein-like I 27 458 IPR028082 -
Arst10g02436 974 FunFam Glutamate receptor 465 583 - -
Arst10g02436 974 Gene3D - 583 709 - -
Arst10g02436 974 SMART GluR_14 467 814 IPR001320 GO:0015276|GO:0016020
Arst10g02436 974 MobiDBLite consensus disorder prediction 946 974 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02436 Arst-Chr10 85715804 85723354 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02436 11 955 Ion Channels AT2G29120 48.586 0.0 883
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02436 K05387 - qsa:O6P43_019170 1146.34