Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02435 ATGATGAAAGGGATGAAGCATATTATTATTGTGATTGTTATTATGGGTTTTATGTTGTTGTGGCCTTGTCCATCATCAGCAGAGAAGACAGTGATTAATGTTGGAGTAGTGCTTGATCTTAGTGAAACAGTGGGGAAGATTGGATTGAGTTGCATCAACATGTCCCTTTCGGATTTCTATGATGCTCATCCTCATTACAACACCAGGATGCTCCTCCATGTCAGAGACTCTCAAACTGATGTGGTTACCGCTGCTTCTGCAGCTGTAGAGTTGATGAAAAAGGAGAAAGTGGAAGCAATAATGGGACCAGTAACATCAATGCAAGCAAGCTTTGTTGTGAATCTTGGAGACAAAGCTCACGTTCCAATCATATCCTTCACCGCAACAAGCCCTTCTTTAACTTCGCTTGGCAGTTCCTACTTCTTTCGAATTGCACAAAATGATTCTACTCAAGTACACGCCATAAGCGACATCATCCAATCCTTCGGCTGGAGACAAGCAGTTCCTATCTACATCGACAACGACTATGGCCGCGCCATTATTCCCTTCTTAACCAATTCCCTTCAACAAGCAAATATCAGGGTCCCATACCTCGCTGTTATTCCTCCCTCCGCCACCGCCGATCACATTGAAGAAGAGCTTTACAAGCTTATGACCATGGAAACTAGGGTTTTTGTTGTTCATATGGTGCGGAATCCTGGGTCCACTCTCTTTGCCATTGCGGATCGGATTGGAATGATGAAACAAGGCTATGTTTGGATTGTAACCAATGGTATGGCTAATACTTTGGCCTCTCTTGACGCCTCGGATATTCAAGTGATGCAAGGTGTGTTAGGAGTGAAAACATATGTTCCCAAAACCAAAAGGGTTGTTGATTTCCAAGCACGTTGGAAGAGGCGTTTCTTGCAGGACAATCCAGCCATGGTTGATGCAAGCATCAATGTGTTTGGATTATGGGCTTATGATGCCTCAACCGCGCTCGCAAGCGCGGTTGAGAGGGCTAATAATAATAATAATTCAAAACCCGGATTTCGAAACACCACAAATAATGCTTCCAGAAATTTCAGTGAGATTGACAATATAGGAGTGTCTCAGAGGGGTGAAGAATTGCGGGATGCTTTATCGGACACCAGATTCAGCGGCCTGGCCGGCCAATTCGGCCTTGTCAATGGAGAATTAGAAGCTGCAACTTTTCAGATAATTAACGTAAATGGTAATGGAGAAAAGGTGATAGGATTTTGGACACCACAGAAGAGATTAACAAGAAATCTTAGCAGCCTAATAAAAAGTAGTACAACTGATTTGAATAATAATCATGATAATGTTCTAGGAGCAATGATATGGCCAGGGGATAGTTATTCAGTTCCAAAGGGGTGGGAGATACCAACCAATGGGAAGAAACTGAGGATTGGAGTTCCGGTGTCATCAAGGCCTCAATTTGTGAAGGTGGAAAATGATGGTGAAACTAACACAACAAAGGTAACTGGTTTTAGCATTGATGTGTTTGAAGCGGTGGTGCAAGCTTTGCCTTATGCTTTGCCATACCAATTCATTCCTTTTGCAAAACCCAATGGGGAGAGCGCCGGCACCTATGATGATTTAATCATGCAGGTCTATTTTGGGGTGTTTGATGCTGTGGTGGCAGACACAACCATCATAGCAAACAGGTCAAAGTACGTTGACTTCACGTTGCCGTATACAGAGTCAGGAGTATCAATGGTGGTGCCAGTGAAAGATAAGAGCAAGAAGGGTGCATGGGTGTTCCTAAAGCCTCTCACCTGGGATCTATGGATGACCACTGGTTGTTCCTTCGTGTTCTTTGGATTCGTAGTGTGGGTTCTTGAGCACCGCATCAACAAAGATTTTCGTGGCCCTCCTTCTCACCAGATCGGCACCAGTTTGTGGTTTTCTTTCTCCACCATGGTCTTTGCTCATCGAGAAAAAGTAGTGAGCAACACTGCACGGTTTGTTGTGATAATATGGGTATTTGTGGTGCTGATTTTGACTCAGAGTTACACAGCAAATTTGTCATCACTACTAACGGTGGAGCAACTTCGACCAACCGTGACCAATGTAAATGATCTAATAAAGTATAGAACACCTGTTGGGTACCATACAGGTTCTTTTGTTCGTGGGATCTTGCTCAACCTTGGTTTCAAGGATTTTCAGCTCATAACTTATAATTCCACAGCACAATGTGATGATCTTCTCAGCAGAGGCAGTCAAAACGGTGGAATTGCTGCTGCATTTGATGAAATTCCATACATTAGGATTCTTCTTGGAACCTATTGCTCTAAGTATACCATGGTGGACCCCACATTTAAAACCGATGGCTTTGGCTTTGTATTCCCAAAAAGTTCTCCTCTGGTGGGTGATGTATCAAGGGCAATTCTGAAAGTAACTGAAGATCCAAGAATGAAAGAAATAGAGAATGCATGGTTTGAGAAGCGAAGTAGTTGCCAGCAAGAAGATGCATCAGTGTCTTCTTCTAATAGTCTTGGCCTAGACAGCTTCTGGGGCCTATTTCTCATTGCTGCATTGGCCTCCACTTCAGCACTCCTCATCTTTGCAGTTACATTCTTGTATGATCATAGACATCAATGGTGGTTCATCAATAATGATTATTCAACATGGACGACCCGAATCCGCATCTTGCTGAGAATCTTCGACCAGAGAGACCCTAGGTCTCAAAGATTCAGGAGAGGTGGTACTGATTCAGTTAAGGAACAAGATAAAGACAATTATGATCAAAGTAGCAGCACCATTGGTCGTCATCATCATCATCATCATGATCATAGCTTAGATGCTGCTTCCACCTACACAGAATACAGCTTCTCCTTTCAAGGATCACCTTGTGAAGACAGCAATAGTGATAATAGTAATGTAGAGCAAAATAATTTGCATAGTCAACCATCTCAACAAGAAAACTGA 2931 0.4295 MMKGMKHIIIVIVIMGFMLLWPCPSSAEKTVINVGVVLDLSETVGKIGLSCINMSLSDFYDAHPHYNTRMLLHVRDSQTDVVTAASAAVELMKKEKVEAIMGPVTSMQASFVVNLGDKAHVPIISFTATSPSLTSLGSSYFFRIAQNDSTQVHAISDIIQSFGWRQAVPIYIDNDYGRAIIPFLTNSLQQANIRVPYLAVIPPSATADHIEEELYKLMTMETRVFVVHMVRNPGSTLFAIADRIGMMKQGYVWIVTNGMANTLASLDASDIQVMQGVLGVKTYVPKTKRVVDFQARWKRRFLQDNPAMVDASINVFGLWAYDASTALASAVERANNNNNSKPGFRNTTNNASRNFSEIDNIGVSQRGEELRDALSDTRFSGLAGQFGLVNGELEAATFQIINVNGNGEKVIGFWTPQKRLTRNLSSLIKSSTTDLNNNHDNVLGAMIWPGDSYSVPKGWEIPTNGKKLRIGVPVSSRPQFVKVENDGETNTTKVTGFSIDVFEAVVQALPYALPYQFIPFAKPNGESAGTYDDLIMQVYFGVFDAVVADTTIIANRSKYVDFTLPYTESGVSMVVPVKDKSKKGAWVFLKPLTWDLWMTTGCSFVFFGFVVWVLEHRINKDFRGPPSHQIGTSLWFSFSTMVFAHREKVVSNTARFVVIIWVFVVLILTQSYTANLSSLLTVEQLRPTVTNVNDLIKYRTPVGYHTGSFVRGILLNLGFKDFQLITYNSTAQCDDLLSRGSQNGGIAAAFDEIPYIRILLGTYCSKYTMVDPTFKTDGFGFVFPKSSPLVGDVSRAILKVTEDPRMKEIENAWFEKRSSCQQEDASVSSSNSLGLDSFWGLFLIAALASTSALLIFAVTFLYDHRHQWWFINNDYSTWTTRIRILLRIFDQRDPRSQRFRRGGTDSVKEQDKDNYDQSSSTIGRHHHHHHDHSLDAASTYTEYSFSFQGSPCEDSNSDNSNVEQNNLHSQPSQQEN 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02435 976 FunFam Glutamate receptor 585 715 - -
Arst10g02435 976 SUPERFAMILY Periplasmic binding protein-like II 443 815 - -
Arst10g02435 976 CDD PBP1_GABAb_receptor_plant 33 424 IPR044440 -
Arst10g02435 976 MobiDBLite consensus disorder prediction 897 933 - -
Arst10g02435 976 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 33 920 IPR015683 -
Arst10g02435 976 Pfam Receptor family ligand binding region 51 406 IPR001828 -
Arst10g02435 976 Gene3D - 347 468 - -
Arst10g02435 976 PIRSF IGluLR_plant 2 950 IPR017103 -
Arst10g02435 976 PIRSF IGluLR_plant 2 950 IPR017103 -
Arst10g02435 976 MobiDBLite consensus disorder prediction 948 976 - -
Arst10g02435 976 Pfam Bacterial extracellular solute-binding proteins, family 3 490 815 IPR001638 -
Arst10g02435 976 SMART GluR_14 469 816 IPR001320 GO:0015276|GO:0016020
Arst10g02435 976 Pfam Ligand-gated ion channel 816 848 IPR001320 GO:0015276|GO:0016020
Arst10g02435 976 FunFam Glutamate receptor 467 585 - -
Arst10g02435 976 Gene3D - 469 584 - -
Arst10g02435 976 CDD GluR_Plant 466 814 - -
Arst10g02435 976 FunFam Glutamate receptor 2.7 722 822 - -
Arst10g02435 976 MobiDBLite consensus disorder prediction 897 922 - -
Arst10g02435 976 SUPERFAMILY Periplasmic binding protein-like I 27 460 IPR028082 -
Arst10g02435 976 Gene3D - 149 314 - -
Arst10g02435 976 Gene3D - 585 711 - -
Arst10g02435 976 FunFam Glutamate receptor 151 311 - -
Arst10g02435 976 Gene3D - 765 822 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02435 Arst-Chr10 85715804 85723354 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02435 11 957 Ion Channels AT2G29120 48.691 0.0 890
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02435 K05387 - qsa:O6P43_019170 1153.27