Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02432 ATGGTGAAGAATCAGGCTCCTACAACCTTGGTTCTAAGTCTCTTCTGGTGGTTCTTTGGTGTGGTAGCAACAGTGATGGGTCAAAGAAACAAGGCAACAACACTACTCCAAACAAGAGTAGTGAAAGTGGGAGTGGTGCTTGATTTAAGTGGGGGAATGGTAGGAAAGATGGGTTCAAACAGTATCAGAATGTGTGTCAATGATTTCTATGATTCTCATCCTTATTACAAAACTAGGCTCCAACTTATCCTTAGGGACTCCCAAAGAGACATTGTTACCGCTGCTGCTCAAGTTGTAGATCTCTTAAAGAATGAGCAAGTGGAAGCTGTGATAGGACCAGTTACAACAATGGAAGCCATGTTTGTGATCAACCTCGGAGACAAAGCGCACGTGCCCATTGTCACGTTCTCAGCAACGAGCCCTTCTCTCTCATCACTCCACACCCCATATTTCTTCCAAATTGCTCAGAAAGATTCAACTCAGGTAGAAGCCATAAGCGCCATTATCCAAGCTTTTCGGTGGAAAGAAGTGGTTCCAATTTATGTGGACAACAGTTATGGCGAAGGACTCATTCCATGGTTAACTAATTCACTTCAAAAAGCATACATCCGTGTTCCTTATTTGTCTGCCATTGATTTCTCAGCCACAGATGATGCCATTGAAAGAGAGCTCTACAAGCTCATGACTATGCAAACTAGATTATTTGTCGTTCACATGACACCCCTTCTTGGCTCTCGTCTCTTCGCCATTGCGAAAACCATTGGCATGATGGATCAAGGCTATGTTTGGATTGTCACCGATGGAATGGCTAATTTCTTCAACTCCTTGGACTCTTCAATTATGGAATCCATGGAAGGTGTCTTGGGCGTTAGACCTTACATTCCAAGAACTAAACAATTTCTTGATTTTAGAGCTAGATGGAAAAGACAGTTCCTAAGAGACAATCCAACACTTGTTGATATCAATCTGAATGCTTTTGGAATATGGGCCTATGATGCTACCACTGCATTGGCCATGGCCGTTGAGAAACTTGACAGCACCCTTTCTGGCTTCACTAATGTGGGCAAGAACTCAAGCAATGTGACTGATCTTGAAAACTTTGGCGTTTCGCGAAATGGTGAGAAGCTGAGAGAAGCTTTGTCAAATGTTAGATTCAAAGGTGTTGGTGGTGACTTCAAATTAGTTGGTGGTGGGGAGTTACAAGCATCAGCATTTGAGATAGTTAATGCGATTGGTAACGGGGAAAGAAACATTGGATTTTGGATGCCAGAAAAGGGACTAATTAGAAATATGAATGCCAAAAATGCAACAACTGCATATTCAACTTCTAAGGAGAATCTAGGAACAATTATATGGCCAGGGGACTCCTACTCTGTTCCAAAGGGATGGCAGATTCCCACAAATGGTAACAAGTTAAAGATAGGGGTTCCAGTGAAAGATTGTGGCTACACCGAATTTGTGAAAATAATTCATGACCCTATTACGAATTCTAGAAAGGTCACTGGATTCTGCATTGATGTCTTCAATGCTGTGGTAGAAGCCTTGCCTTATGCCCTTCCATTTGAATTCATTCCATTTGAAAAGTCCAACGGTGAGATGGCAGGAACTTATGATGATTTGATCACCCAAGTTTATTATGGGAAGTTTGATGCTGTGGTGGGGGATACAACGATTACGGCAAACAGGTCCAATTTTGTTGATTTCACGTTGCCGTACACAGAATCTGGTGTGACTATGGTTGTTCCAATAAGAGACAACAGAAAGAAGAATGCATGGGCCTTCTTGAAGCCATTGACATGGGACCTTTGGGTTACAACATTTTGTACATTTGTATTCATAGGATTTGTTGTTTGGGTTCTTGAACACCGAATCAACAACCATTTCAGAGGGCCTCTGCCTTATCAAATTGGCACTAGCTTGTGGTTTTCCTTTTCAACCATGGTTTTTTCTCATCAGGAGAGAGTGGAGAGCAACTGTGGAAGATTTGTGGTGATAGTATGGGTTTTTGTGGTTCAAATTTTGGTTCAAAGCTACACTGCAAGCCTTACCTCTCTCTTAACAGTTGAGCAACTACGCCCAGCGAATACTGATGTTCATCAACTCCTAAAGAATCGGTTGAATGTTGGTTATCTGGAAGGTTCTTTTGTTCCTGGAATGTTGAAGGACATGGGATTCAAAGATGAGCAGCTCAAGGTTTATAATTCCGTAGAAGAATGCAATGACCTCTTCACCAAAGGAAGCGCCAATGGCGGCATTGACGCGGCGTTCGACGAAGTCCCCTACGTGATGCGCCTCCTTGAGACTTATTGTTCCAAGTATGCCATGGTTGAGCCAAGATTTAAAACTGGTGGCTTTGGCTTTGTGTTTCCAAGAGGGTCACCTCTTGTGGGAGACATATCAAGGGCAATATTGAATGTGATGAGACAAGGAACCAACATGAGAAGAATTGAGAATGCATGGTTGAATGGAAGCAGTTGTAGAGATTCTAATACTAATGCACAAGTATCTTCTTCTACAAGCCTAGGACTTGAAAGCTTCTGGGGTCTATTCTTGGTTGTAGGTGTTTCTTGCTTATTAGCACTCATAATCTTTTTAGCCACATTCCTATATCAGCATAGACATATTTTGTCAAATCATAATCGTTCTGATAGTTCCATTAAAAGACGTATTGGAGTGTTACTAAACACCTTCAATGAGAGAGACTTGAGCTCTCACACTTTCAAGAAAAGTGATTCAAGTGTAACTAGTAGTCCTACGTCAGTATTAGCAAGTACACATTGCCCTCCAATTAGTCCATCTAGTTACACAGAATCAAACTTTTTTATCAGTCCAGACCAACATCGTTATTATGCTACTCATCAACACAAAGCCACACAAGAACCTGCCCCCATTACAAACAACACACACACCAAATCTCAAGCCACAGAGATTCCTCTACAAATGTAG 2946 0.4179 MVKNQAPTTLVLSLFWWFFGVVATVMGQRNKATTLLQTRVVKVGVVLDLSGGMVGKMGSNSIRMCVNDFYDSHPYYKTRLQLILRDSQRDIVTAAAQVVDLLKNEQVEAVIGPVTTMEAMFVINLGDKAHVPIVTFSATSPSLSSLHTPYFFQIAQKDSTQVEAISAIIQAFRWKEVVPIYVDNSYGEGLIPWLTNSLQKAYIRVPYLSAIDFSATDDAIERELYKLMTMQTRLFVVHMTPLLGSRLFAIAKTIGMMDQGYVWIVTDGMANFFNSLDSSIMESMEGVLGVRPYIPRTKQFLDFRARWKRQFLRDNPTLVDINLNAFGIWAYDATTALAMAVEKLDSTLSGFTNVGKNSSNVTDLENFGVSRNGEKLREALSNVRFKGVGGDFKLVGGGELQASAFEIVNAIGNGERNIGFWMPEKGLIRNMNAKNATTAYSTSKENLGTIIWPGDSYSVPKGWQIPTNGNKLKIGVPVKDCGYTEFVKIIHDPITNSRKVTGFCIDVFNAVVEALPYALPFEFIPFEKSNGEMAGTYDDLITQVYYGKFDAVVGDTTITANRSNFVDFTLPYTESGVTMVVPIRDNRKKNAWAFLKPLTWDLWVTTFCTFVFIGFVVWVLEHRINNHFRGPLPYQIGTSLWFSFSTMVFSHQERVESNCGRFVVIVWVFVVQILVQSYTASLTSLLTVEQLRPANTDVHQLLKNRLNVGYLEGSFVPGMLKDMGFKDEQLKVYNSVEECNDLFTKGSANGGIDAAFDEVPYVMRLLETYCSKYAMVEPRFKTGGFGFVFPRGSPLVGDISRAILNVMRQGTNMRRIENAWLNGSSCRDSNTNAQVSSSTSLGLESFWGLFLVVGVSCLLALIIFLATFLYQHRHILSNHNRSDSSIKRRIGVLLNTFNERDLSSHTFKKSDSSVTSSPTSVLASTHCPPISPSSYTESNFFISPDQHRYYATHQHKATQEPAPITNNTHTKSQATEIPLQM 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02432 981 Pfam Ligand-gated ion channel 823 856 IPR001320 GO:0015276|GO:0016020
Arst10g02432 981 SMART GluR_14 471 823 IPR001320 GO:0015276|GO:0016020
Arst10g02432 981 FunFam Glutamate receptor 369 470 - -
Arst10g02432 981 Gene3D - 472 590 - -
Arst10g02432 981 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 41 902 IPR015683 -
Arst10g02432 981 FunFam Glutamate receptor 471 591 - -
Arst10g02432 981 Pfam Receptor family ligand binding region 60 410 IPR001828 -
Arst10g02432 981 CDD PBP1_GABAb_receptor_plant 42 431 IPR044440 -
Arst10g02432 981 Gene3D - 368 471 - -
Arst10g02432 981 SUPERFAMILY Periplasmic binding protein-like I 37 454 IPR028082 -
Arst10g02432 981 CDD GluR_Plant 470 821 - -
Arst10g02432 981 Gene3D - 722 828 - -
Arst10g02432 981 Gene3D - 159 323 - -
Arst10g02432 981 Gene3D - 591 716 - -
Arst10g02432 981 PIRSF IGluLR_plant 5 955 IPR017103 -
Arst10g02432 981 PIRSF IGluLR_plant 5 955 IPR017103 -
Arst10g02432 981 MobiDBLite consensus disorder prediction 958 981 - -
Arst10g02432 981 Pfam Bacterial extracellular solute-binding proteins, family 3 497 822 IPR001638 -
Arst10g02432 981 MobiDBLite consensus disorder prediction 955 981 - -
Arst10g02432 981 FunFam Glutamate receptor 157 311 - -
Arst10g02432 981 SUPERFAMILY Periplasmic binding protein-like II 448 822 - -
Arst10g02432 981 FunFam Glutamate receptor 591 721 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02432 Arst-Chr10 85589639 85595144 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02432 37 937 Ion Channels AT2G29120 49.835 0.0 880
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02432 K05387 - qsa:O6P43_019170 1141.33