Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02406 ATGGCCATGGGGGATTCAAGGGTTGACACAATTGCACGCTTAGCTCAATGGAAAATCGATAACTTCGGACCTTGTTCCTACAAGAAATCTGACCCTTTCAAGGTCGGAATCTGGAATTGGTACTTATCCATAGAGAGAAACAGGTACCTCTACATACACCTGTTTCCAGAACCTTCTCGTGTCTCCAAGGAGCAGCCACCCGTTGCTCGTTTCATTCTTCGTGTTTCCAATGCTGGCTCTTCCCGCAGGTTCTATATTTCCCCTGTCCATGAAAGGATACTTAGGACATATGATGACTTTGTCTGGCCTGTTGATACTTCATTTGTTGGTCGCTTCATTATTGATGTTGAATTTCTTGACTTGAAGATATGCCCTCTGAATGGTGGGGAAGCTAGTTCTATATGGCCATCCGAGGGAAAATTGCAATCCATTGCATCTCAAAGTACTCTTAGTTGCCTCTCACGCATGCTTGACGATGCTATTCATGCTGACCTAACCATTATTACAGCTGATGGTACATTGAGAGCTCACAAGGCAATCTTGTCTGCAAGTTCGCCGGTGTTCCAGAGTATGTTTCATCACAACCTGAGGGAGAAAGAGTCATCTACTATCCATATAGAAGACATGTCGCTAGAATCTTGCACGGCTCTTCTAAGATACTTGTATGGAACAATCAAGCAAGACGATTTCTGGAAACACCGGCTTGCATTGCTTGGAGCAGCCAATAAATACGACATCACCGGTCTCAAAGACGTGTGCGAAGACAGTCTGCTGGAAGATCTTAACTCCGGAAATGTTCTCGAGAGGCTCAACGAAGCTTGGCTTTATCAATTACACAAGTTAAAGAAAGGATGCTTGACCTTCTTATTTGACTTCGGAAAGATATATGATGTTAGAGATGAAGTAAACAACTTTTTTCAGCATGCTGATAGGGAGCTAATGATGGAGATGTTTCAGGAAGTGCTCACAGTTTGGAGACCGGTATAA 987 0.4357 MAMGDSRVDTIARLAQWKIDNFGPCSYKKSDPFKVGIWNWYLSIERNRYLYIHLFPEPSRVSKEQPPVARFILRVSNAGSSRRFYISPVHERILRTYDDFVWPVDTSFVGRFIIDVEFLDLKICPLNGGEASSIWPSEGKLQSIASQSTLSCLSRMLDDAIHADLTIITADGTLRAHKAILSASSPVFQSMFHHNLREKESSTIHIEDMSLESCTALLRYLYGTIKQDDFWKHRLALLGAANKYDITGLKDVCEDSLLEDLNSGNVLERLNEAWLYQLHKLKKGCLTFLFDFGKIYDVRDEVNNFFQHADRELMMEMFQEVLTVWRPV 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02406 328 ProSiteProfiles BTB domain profile. 163 222 IPR000210 GO:0005515
Arst10g02406 328 PANTHER OS08G0495500 PROTEIN-RELATED 3 327 IPR044714 -
Arst10g02406 328 CDD BTB_POZ_ZBTB_KLHL-like 162 244 - -
Arst10g02406 328 Gene3D Potassium Channel Kv1.1; Chain A 137 290 IPR011333 -
Arst10g02406 328 SMART BTB_4 163 261 IPR000210 GO:0005515
Arst10g02406 328 CDD MATH 17 103 IPR002083 GO:0005515
Arst10g02406 328 Pfam BTB/POZ domain 157 259 IPR000210 GO:0005515
Arst10g02406 328 SUPERFAMILY POZ domain 146 259 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02406 Arst-Chr10 85115188 85117877 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Arst10g02406 BTB 2.4e-22 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02406 K10523 - cave:132189340 578.941