Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02357 ATGGCAAAGTGTCACCGGAACAACGTCGGATCCGTCGTACTCGACCACCGCCACCCTGCCAAGAATGCTGCCACCGCCGGCCACTTCCGCTGGAACTCCATCTCCGCCTCCTCCATCCGCCGGATCGTTCTCGACGCCGTCAGCTGCGGCACCTCACGCTACGGTTACCATCAGCGCCACGACGACGACGACGAAGGATCCAGCTCCGCCGCAACTTCTACAGCGAGTCTGGCCTCCGGCAAGGAAGAGGCGCTGGTGGAGCTGAAGCAAGTGGTGAAGGACCTGCAGCAGGGAGAGGACTTGGCGAAGCGGCGCATGGCGGCGACGACGGTGAGGTCGCTTGCGAAGGAACGATCGGAAGTTAGGGGAACGCTCGCTATGCTTGGAGCTATTCCTCCGCTCGTCGGAATGCTCGATTCCGAAGACGTTCATTCTCAGATTGCTTCGCTCTATGCGTTGCTCAATCTCGGGATCGGCAACGATGCAAACAAAGCAGCCATCGTTAAAGTTGGTGCTGTTCACAAGATGTTGAAGTTAATTGAATCACCGGATGCTACTAATTCATCAGTTTCTGAAGCAATTGTTGCTAATTTCCTTGGATTGAGTGCTTTGGATTCAAATAAACCAATAATTGGATCCTCTGGTGCAATTCCATTCCTAGTTAGAACCCTTCAAGATTTGGATTACGAATGTAGCCACCAAGCCAAGCAAGATGCTCTTCGAGCTCTATACAATCTATCAATCTTTCCAACCAACAGTTCATTCATTTTGGAAACTGAGTTGGTCCCCTTTTTGGTTAGTTCAATTGGAGACATGGAAGTGAGTGAGAGAGTGCTTGCGATTCTAAGCAATCTGGTTCCAACTCCAGAGGGCAGGAAAGCTATCAGTGCTGTAAAGGATTCGATCTTCATTCTGGTGGATGTGTTGAATTGGACGGATTCGCCGGAGTGCCAAGAGAAGGCGTCATACATTTTGATGATTATGGCACACAAATCCTACAGCGACAGGCAGGTCATGATTGAGGCTGGGATTGGATCATCGCTGCTTGAATTGACCCTTCTTGGTTCCACATTGGCACAGAAAAGGGCCTCAAGGATCTTGGAATGTTTGAGGACAGACAAAGGGAAACAAGTTTCTAGAAGCTATGGTCGAGGAAGCTTGGGGGCCGATATCTCTGCGCCTATTTTCAGCGCGTCGCCATCTTTTACGAAGGCTTCAGGTGGAGGAGGTAAAGGCTATTTGGAGGAAGAGGAGGAGGAGGAAGATACGATGAGTGAGGAGAAGAAAGCAGTGAAGCAATTAGTCCAACAGAGTTTGCAAAACAACATGAGGAAAATTGTCAAGAGGGCCAACTTGCGTCAAGATTTTGTTCCATCCCAGCATTTGGCTTCACTTACTTCAAGTTCAACTTCTAAGAGCCTGCCATTTTAA 1431 0.4969 MAKCHRNNVGSVVLDHRHPAKNAATAGHFRWNSISASSIRRIVLDAVSCGTSRYGYHQRHDDDDEGSSSAATSTASLASGKEEALVELKQVVKDLQQGEDLAKRRMAATTVRSLAKERSEVRGTLAMLGAIPPLVGMLDSEDVHSQIASLYALLNLGIGNDANKAAIVKVGAVHKMLKLIESPDATNSSVSEAIVANFLGLSALDSNKPIIGSSGAIPFLVRTLQDLDYECSHQAKQDALRALYNLSIFPTNSSFILETELVPFLVSSIGDMEVSERVLAILSNLVPTPEGRKAISAVKDSIFILVDVLNWTDSPECQEKASYILMIMAHKSYSDRQVMIEAGIGSSLLELTLLGSTLAQKRASRILECLRTDKGKQVSRSYGRGSLGADISAPIFSASPSFTKASGGGGKGYLEEEEEEEDTMSEEKKAVKQLVQQSLQNNMRKIVKRANLRQDFVPSQHLASLTSSSTSKSLPF 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02357 476 SMART arm_5 160 203 IPR000225 GO:0005515
Arst10g02357 476 SMART arm_5 204 248 IPR000225 GO:0005515
Arst10g02357 476 SMART arm_5 118 158 IPR000225 GO:0005515
Arst10g02357 476 SUPERFAMILY ARM repeat 87 368 IPR016024 -
Arst10g02357 476 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 27 476 - -
Arst10g02357 476 Gene3D - 57 387 IPR011989 -
Arst10g02357 476 Coils Coil 414 437 - -
Arst10g02357 476 MobiDBLite consensus disorder prediction 403 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02357 Arst-Chr10 83680665 83682956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02357 95 384 U-box Gene Family AT1G67530 30.303 2.13e-28 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02357 - - qsa:O6P43_015754 564.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g03748 6 105660525 105664141 Arst10g02357 10 83680665 83682956 PCT