Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02340 ATGGATACACAACAACAACAACCTCATCATCATCGGTGTGATAAAATTGCAAGCAAGAAACCATGGCAGAGTTCACAAGAAGATCAAAAGGAGCATCAGCAAGAGCAAGTAGATACTACTTTGTTGGATCTGAATCTGAATGTCCATGATGATGATGAGTGCAGCACAGAGTTGAGCCTCATCACGTGTTTGGACATGGATAATTCCTCAAAAACTACTTCAATTGAAGACAACAACAACAACAACACATGTTGTGCAGGTTCTGATCAAAGAGTGTTCTCTTGCAACTACTGCCAGAGGAAATTCTACAGTTCACAAGCTCTTGGAGGACACCAAAATGCTCACAAGAGAGAGAGATCAATTGCAAAGAGAGGTCAGAATAGGTTATTAGGATCCTCTCCATTTATGATCCCTTTTCTTCATCATCATCATAGATATGCTAGTATTGCATCTTTACCTCTCTATGGTGCTTGTGCAAACAAACCACTTGGAATTCAAGCTCACTCCTTGATTCACAAACCTTCTTTTGTTCATCATCATCATCATATATCAAATGGCTTTGGAAGACCACCTCCCCTCATTGGAAGTAGTAGTGTTGGTAGATTCCAGGTGGCCAAGAACATGCTCAATTCTGCAGCAGATAATGAAGAAATCACAGCTTATCTTGTTACTAGGACTACTCAAGAAGACAATATAATGACCAAGAATAATAAGCACCTTGATTTATCTCTTAAACTCTAG 741 0.3941 MDTQQQQPHHHRCDKIASKKPWQSSQEDQKEHQQEQVDTTLLDLNLNVHDDDECSTELSLITCLDMDNSSKTTSIEDNNNNNTCCAGSDQRVFSCNYCQRKFYSSQALGGHQNAHKRERSIAKRGQNRLLGSSPFMIPFLHHHHRYASIASLPLYGACANKPLGIQAHSLIHKPSFVHHHHHISNGFGRPPPLIGSSSVGRFQVAKNMLNSAADNEEITAYLVTRTTQEDNIMTKNNKHLDLSLKL 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02340 246 ProSitePatterns Zinc finger C2H2 type domain signature. 95 115 IPR013087 -
Arst10g02340 246 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 11 246 IPR044246 GO:0009788
Arst10g02340 246 ProSiteProfiles Zinc finger C2H2 type domain profile. 93 120 IPR013087 -
Arst10g02340 246 Gene3D Classic Zinc Finger 68 133 - -
Arst10g02340 246 MobiDBLite consensus disorder prediction 1 36 - -
Arst10g02340 246 SUPERFAMILY beta-beta-alpha zinc fingers 89 120 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02340 Arst-Chr10 83039940 83040951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02340 88 246 C2H2 Transcription Factor Family AT1G80730 48.276 3.29e-33 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02340 - - aip:107621568 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g03741 6 105554968 105556150 Arst10g02340 10 83039940 83040951 PCT