Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02330 ATGCGCATTGGCGAAGGCCTACAAGTACACCTACACTTTAATTTGAAGGAGATCAAAGAGAGATTTGCTTATCAGCGGTCTGTGGATCATTATAAGTCCTACATGCGGAGACTGGAGGTCACAACTCAGCAATCTCAGCAAAGTGAGAAGGATGCTACTGGCTCTGCTGCTTCAGTCGTCAATCTCGATGCGTCAACTGTTGATCCCGAAGAAGGCGTTAATTTGAGGCTGCAGGTGCAGAAGCTCACTCGGAGCCTTCATGATCAGGCTCAAGAGCTGAACAAAACTCGGGAGAACTATTGGGAGATCCTCACATGCGTGACAGACACGAATGAGCTCAGACAAAGGCATTGGGGTTCTTGGGTCTCTGAAATTCGCCACCCTATTTTGAAAACAAGGATATGGCTTGGAACGTTTGAGACAGCAGAAGATGCAGCAAGAGCGTACGATGAAGCAGCAAGGTTGATGTGTGGAACAAGAGCCAGAACCAACTTCCCTTACAACCCTGATTCCTCTCACTCCACGCCATCTAAGCTTCTCTCTGCTACTTTAACCGCTAAGCTTCACAGGTGTTACATGGCCTCTCTTCAAATCACTAGACCTTCTCCCAACAACAATGGCGCCTTTTCCACTGCACCAACACCCACCATCCAACAGAAGAGACCACACAAGGATGAACAACAGCAACAGCAACAGCAACAAGAACAACAATGTTCATCTTCATTGGAAGATGGCAACTGGGTTTCCATGAAGAAGGTTAAAGTGGAAAATCATGAGTTTATTAAGCCTCTTGAAGAAGATCACAATCACATTGAGCAAATGATTCAGGAGTTGCTTCATTATGGCTCCATTGAGCTCTGTTCTCTTTAA 870 0.4598 MRIGEGLQVHLHFNLKEIKERFAYQRSVDHYKSYMRRLEVTTQQSQQSEKDATGSAASVVNLDASTVDPEEGVNLRLQVQKLTRSLHDQAQELNKTRENYWEILTCVTDTNELRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGTRARTNFPYNPDSSHSTPSKLLSATLTAKLHRCYMASLQITRPSPNNNGAFSTAPTPTIQQKRPHKDEQQQQQQQQEQQCSSSLEDGNWVSMKKVKVENHEFIKPLEEDHNHIEQMIQELLHYGSIELCSL 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02330 289 PRINTS Ethylene responsive element binding protein signature 110 121 IPR001471 GO:0003700|GO:0006355
Arst10g02330 289 PRINTS Ethylene responsive element binding protein signature 132 148 IPR001471 GO:0003700|GO:0006355
Arst10g02330 289 Pfam AP2 domain 114 158 IPR001471 GO:0003700|GO:0006355
Arst10g02330 289 MobiDBLite consensus disorder prediction 229 243 - -
Arst10g02330 289 FunFam Ethylene-responsive transcription factor 2 111 167 - -
Arst10g02330 289 Coils Coil 79 99 - -
Arst10g02330 289 CDD AP2 114 168 IPR001471 GO:0003700|GO:0006355
Arst10g02330 289 MobiDBLite consensus disorder prediction 198 218 - -
Arst10g02330 289 SMART rav1_2 114 172 IPR001471 GO:0003700|GO:0006355
Arst10g02330 289 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 53 236 - -
Arst10g02330 289 ProSiteProfiles AP2/ERF domain profile. 99 166 IPR001471 GO:0003700|GO:0006355
Arst10g02330 289 SUPERFAMILY BAR/IMD domain-like 23 125 IPR027267 -
Arst10g02330 289 MobiDBLite consensus disorder prediction 198 243 - -
Arst10g02330 289 Gene3D AP2/ERF domain 111 167 IPR036955 GO:0003700|GO:0006355
Arst10g02330 289 SUPERFAMILY DNA-binding domain 114 168 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02330 Arst-Chr10 82729925 82747368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02330 113 289 AP2-EREBP Transcription Factor Family AT5G25190 57.459 2.56e-61 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Arst10g02330 AP2 5e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02330 - - adu:107470449 561.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g02330 10 82729925 82747368 Arst10g02330 10 82729925 82747368 ECH
Arst6g03736 6 105479587 105480539 Arst10g02330 10 82729925 82747368 PCT