Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02312 ATGGATTATGGAAGTGTAGTTATTACTATACCAAACTCAACAATTCATACATACACCACCAATTCTATGATGATGATGACTGCAGATTATGAAAGCGTGAAGCAGCTTCCTCCTGGGTTTTTGTTCTCTCCAACGGATGAAGAACTTGTCCTTCACTTTCTCTATGCCAAGGCTTCTCTTTTGCCATGCCATCCCAACATCATCCCTGATCTTGATGTCTCTCTCGCTCATCCTTCCCAACTCAACGGTAAAGCGTTGTCAAGCGGAAATCAATACTATTTCTTCAGCAAAGTGAAGGAAAAAAGAATAACAGAAAATGGGTATTGGAAGGAAATAGGTGAAAGTGAAGCAATATTGTCATCAACGTTTGAGAAGAAAGTAGGGACAAAGAAGAACCTTGTATTCCACATAGGAGAAGCTCCACACGGCATTGAAACCAGTTGGGTCATGCAAGAATATCATATTTGCCCATCCTCTAACATTATTTCTACAACTAGAGCCAGAAGAAAACACGATCATCAAATTTGGAGCAAATGGGTTTTGTGCAAAGTGTATGAAAAGAAGGGGTCCGTACGAGGTGTAAACTACTGTAGCGACGATGATGACAGTGGGACAGAGCTATCTTGGCTTGACGAAATTTATCTCTCGTTGGATGATGATCTGGAAGAAATTAGCGTCTCCATTTTAGATTGA 693 0.4055 MDYGSVVITIPNSTIHTYTTNSMMMMTADYESVKQLPPGFLFSPTDEELVLHFLYAKASLLPCHPNIIPDLDVSLAHPSQLNGKALSSGNQYYFFSKVKEKRITENGYWKEIGESEAILSSTFEKKVGTKKNLVFHIGEAPHGIETSWVMQEYHICPSSNIISTTRARRKHDHQIWSKWVLCKVYEKKGSVRGVNYCSDDDDSGTELSWLDEIYLSLDDDLEEISVSILD 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02312 230 Gene3D NAC domain 45 191 IPR036093 GO:0003677|GO:0006355
Arst10g02312 230 Pfam No apical meristem (NAM) protein 37 155 IPR003441 GO:0003677|GO:0006355
Arst10g02312 230 PANTHER NAC TRANSCRIPTION FACTOR 56 35 191 - -
Arst10g02312 230 ProSiteProfiles NAC domain profile. 36 187 IPR003441 GO:0003677|GO:0006355
Arst10g02312 230 SUPERFAMILY NAC domain 22 187 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02312 Arst-Chr10 81941316 81942409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02312 36 195 NAC Transcription Factor Family AT1G69490 38.095 4.87e-33 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst10g02312 NAM 1.1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02312 - - adu:107470472 475.707