Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02285 ATGGCCGCAATGAAGTCAATTCCAGGGTACCGGTTTCATCCAACCGATGTTGAGCTGGTTCAGTACTTTCTGAAAAGGAAGGTGATGGGGAAGAGATTCCCTTGTGATGTGATTGCTGAACTTGATATATACAAATATCCGCCGTGGGATCTACCAGATCATTCTTTGCTTAAAACTGGAGATTTGGAATGGTACTTCTTTTGCCCTCGAGGGAAGAAGTATTCGAGCGGAGGGAGGATGAATAGGGCCACAGAATGTGGGTACTGGAAGACTACTGGCAAAGATAGATCCGTTGAGAACAAGAAGCTTGTTGTGGGCATGATAAAGACTCTGGTGTTTCACATGGGTAAAGCACCCAAGGGAGATCGAACTGATTGGGTTTTGCATGAATACCGACTTCAAGATAAGGACCTTGCTGATAAGGGTGTTCAACAGGATTCTTATGTGATATGTAAAGTGTTTCAAAAGGATGGTCCTGGTCCTAGGAATGGTGCACAATATGGAAGGCCGTTTAATGAGGAAGACTGGGATAAAGAGGATGAAATTGACTGTGTAGAATCTGCACCTGTTGCTGCTCTACCTGCTGCAGTTCCTATACAACCCGCTTCATGTCATAGCTCTGTTGTGAATAACGTGAATCTCTCTGTGAGTGAATGCTATGGGTTGACCTCTGTTTCGTGTTTAACAGGGCCAATGCCTTCTTGCTCAGCACATCCTTCAGCTCCAAGTAATCAAGTTGATGGTGACATTACACCAGTGCCTGGTTCCTCCATAGAAGATAACATAATGGCTCCTACTCAGAACACCACAACTGAAAAGGTTGACAATCCTCCTGACATAAACAATGCTGAAGGAACACCTTGCTTTGATCCCAATGAGATTTTTGGGGGTCTGGGTGACCTTGATGGTTTGTTCGAAATGGGTGGAATTGGACATGGTTTTTCCTGCGGCCAAAATGGTGGATATACTGTGAATGAAATGCTTTCTGCGGGTGATGGGTTGCGTTTCCCTGATCCCCTGGACTACTTGGAGTTGGGTGACCTCGACACTCCATTGTTATGGGAGACTAATGAACAAGGAAATTGGAGCCAGGACAATAAGTGA 1104 0.4511 MAAMKSIPGYRFHPTDVELVQYFLKRKVMGKRFPCDVIAELDIYKYPPWDLPDHSLLKTGDLEWYFFCPRGKKYSSGGRMNRATECGYWKTTGKDRSVENKKLVVGMIKTLVFHMGKAPKGDRTDWVLHEYRLQDKDLADKGVQQDSYVICKVFQKDGPGPRNGAQYGRPFNEEDWDKEDEIDCVESAPVAALPAAVPIQPASCHSSVVNNVNLSVSECYGLTSVSCLTGPMPSCSAHPSAPSNQVDGDITPVPGSSIEDNIMAPTQNTTTEKVDNPPDINNAEGTPCFDPNEIFGGLGDLDGLFEMGGIGHGFSCGQNGGYTVNEMLSAGDGLRFPDPLDYLELGDLDTPLLWETNEQGNWSQDNK 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02285 367 FunFam Nac domain-containing protein 86 15 159 - -
Arst10g02285 367 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
Arst10g02285 367 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Arst10g02285 367 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 224 - -
Arst10g02285 367 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
Arst10g02285 367 Gene3D NAC domain 15 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02285 Arst-Chr10 81233297 81236142 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02285 1 359 NAC Transcription Factor Family AT5G09330 42.162 4.86e-92 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst10g02285 NAM 6.1e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02285 - - adu:107470479 751.125