Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02259 ATGGAAACAAACCACCGCAACACTATTTGCACATTCACAGATATTGATATCACTAATTGGAACAATAATGATCTTCCTCATCATGATTATGATGAAAATAAGATCATGGAAACAAAACAAGAAGAAGATCATAACAACCTCACTACTCTCAATGATAACCAAATTCCTCTTATGTCCTGGCCCAACCTTCAACAACAAAGACCAGCAATACTCTCACCGTCATCCTCATCTTTTAGAACCTTCTTTAGTGACATAATAGGGAACCAAGTGCAAGAAGTCAAAGACGAAGAGGCTGAAGAAGAATTAGGAGTGATGAAGGAGATGATGTACAACATCGCCGCTATGCAACCGGTGGACATCGACCCGGCTAGCGTTCGAAAGCCGAGGAGGCGAAACGTGCGCATAAGCGACGACCCTCAGAGCGTGGCAGCGCGTCACAGAAGGGAGAGGATCAGTGAGAGGATCCGAATCCTTCAGAGGTTAGTTCCAGGTGGCACCAAAATGGACACCGCTTCCATGCTCGACGAAGCCGTTCGATATGTTAAGTTCTTGAAGCGCCAAGTCAGGTTCCTCGAATCAAATCCAAATCAACTACCACCTAATTGGCCTTTTGCACCACTACTTACTATTAATAATTTGCTTCACGCTCCTTCTGCTGCTGCCGCCACTTCCATGCCACCGCCACCGCCGCCGCCGGGGCTACCCGGATTTGGAACCCTAAGCAGCCATGGCCATCATGATTAG 744 0.4704 METNHRNTICTFTDIDITNWNNNDLPHHDYDENKIMETKQEEDHNNLTTLNDNQIPLMSWPNLQQQRPAILSPSSSSFRTFFSDIIGNQVQEVKDEEAEEELGVMKEMMYNIAAMQPVDIDPASVRKPRRRNVRISDDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAVRYVKFLKRQVRFLESNPNQLPPNWPFAPLLTINNLLHAPSAAAATSMPPPPPPPGLPGFGTLSSHGHHD 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02259 247 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 37 216 IPR045843 GO:0003700|GO:0006355
Arst10g02259 247 SMART finulus 141 190 IPR011598 GO:0046983
Arst10g02259 247 Coils Coil 174 194 - -
Arst10g02259 247 Gene3D - 138 203 IPR036638 GO:0046983
Arst10g02259 247 MobiDBLite consensus disorder prediction 222 236 - -
Arst10g02259 247 FunFam BHLH transcription factor 138 201 - -
Arst10g02259 247 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 140 200 IPR036638 GO:0046983
Arst10g02259 247 Pfam Helix-loop-helix DNA-binding domain 145 184 IPR011598 GO:0046983
Arst10g02259 247 MobiDBLite consensus disorder prediction 220 247 - -
Arst10g02259 247 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 135 184 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02259 Arst-Chr10 80499220 80499963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02259 102 200 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09750 84.848 9.80e-46 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst10g02259 HLH 1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02259 - - aip:107620984 400.593