Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02257 ATGAGTGAAAGTGGCAGGAAACGCTCTTCAAAGTGGGATACAAGAGATGATCCTGAATTTGGACCTGATAGTAAGCACTTGCGTTCTGGATGGTCCTCTGGAGATGTTGCTGGCAGCAATAACTCAAAATGGTCTTATATGGAAGGAAATGACAAGATGAAACCTCGCATGAGTAAGGAACCTTTTTCTGGAGGCAGGGGTTCAAATAAAGATGATATTATGAATAAAGACTATAGATGTTTGGATGCAAAAATGGAGTGGGAGGCGGATGCAAGTTACAGCAGGAGACGCAGTCCATCCCCAAAAAGTGGTTGGAGCAGGTCGGGCAGGAGTAGTAGAAGCAGAAGCCCTCCACATGGTTTCAAGTGGGATTCAGGAGCCAATGACAGAAATAGAACAAGGGCTGCAGAATCAAAGCAAATATGCAGAGATTTTGCTGTTGGAAAATGTAGAAGAGGAAGCCATTGCTATTTTCTTCACCATGATGACCAAAATTATGAGGATATTCGGGAAAGTAAAAACCGGGAAGATGGAGCTCCAAGATATTCTGCTTCACATGAGAGCAGGGAACATACTCTTAGGAGTAGATCCACTGAAGCTTGTGTTCATTTTGCAAAAGGCAGATGTAGAATGGGAGCATCATGCAAGTATGTGCATCATAACAATTCTGATGAATATGGTAAGGGTACTCTGGATGAATTAACTAGAGAAAGGGAAAATGATGGAAGGCGCAGAGATAATTCTTTTGAGCAGGGTGGTGGCCACATACCAAGCCGCAGTGGTGATACCCTTTGCAAATTTTTTGCTAATGGAAATTGTCGTAATGGTAAGCATTGTAGGTTTTCTCATGATAGGCAAGACAGAAGCTTAAGGGATGATAGATGGGGAAGCAATCTTGCTGGAGACCATCAGACCTTGGATAGACCAAAATTGAGTGATTCAGCTAGTCCTACTAGAAGGCTTAGAAGTGATAGATGGGGCACAGATGGCATTATGGCTGATAAGGATAAAGTATGGGACAGTCCAAACCGGAATGATATAGCTACCTATGATTCAGCAAAGTTGGTTGAAGAAAAACCTGGAAATATAGGTGCCACTGAGCATGAACAAACTGTATGGCCTGTGAAGGAAGGATGGGGTCATAGTTTAGACCAGAGCAGTGTGCAGGGTGAACCACCATTTTTAAGTGATAAGAAGGAAGCTGACCATTGGATAGCAGACAATGCTGGTGCCAGCATTCCCGTTTCCCAGTCAGTAGCTGCAGACATCTGGCCTGGGGACGCAAAAATGTCTCCTGATTGGAATTATAGAGCAGGATCTTCCACCCGTACGGAAATAGAGCATGGACAGAACGATCGTGGGTTAACTCAAGGAAGTACATATCCAGCCACCACTGAACATGACAGAATACAAGTTCCAGGGCAAGGTTTTAATCAGAATGTGCAAAATGTTAATCTTTTGCATTTGCCAAGTTGCCATGCAGTTGGACAAAATAAAGTGACAGTTCCCATTCTTCCTTCAAGAGCAGGAATTCCTGAAGGTATGCAAAAGCAAGAAGTCTCTGTTGAGAAAAAGTACTCTGCTGAGCCAAATATCACAGGTGAAGGCTCATCACAGATTAGTTCAAGTAATCCTTCAACACAGGACACAGTAAGCAAAGAACAGCTTGCTCAACTTTCCAATCTCTCAGCCTCTCTTGCTCACATCCTTGGATCTGGTCAGCAGCTGCCACAACTTTATGCTGCCTTAAATTCTCATAATACAAATGACACTCCCTCCTTAGCCAACACGGAAGTGCCTGCTATGCCTGTTTCCAATACGTATGTCAAGCCAGATCCTGCTGTTGGATTTGTAAAGCAGTATGATCCAATGAGTGATAGCGTTGACCTAAATGATGCTGAAGCAAGTGGAATCTGCCCAGTCATTTCTCCAAGTAAAAAAAGTGCAAATATAGAAATTTCATCACTGTTGTCTAACACTGGGAAACAAAATTGTGGTGATACTTCTAAGGCCCCCTCCTCAGAAGAGCAACCTGCCAAGAATGAACATCTGACCCAATTGCAGCCAGGTCAAAACATTGAGATACAGAAGGAAACCAATGAAGCGGTAGCTGATGATAAGCCAAATCCTCAAGATGATCATAAAATTACAAAAGAGAATGGTCCTTCAGAAAACATAGACCACAATGGTGTTGAGGCCAATAAAAGCAAGGATGTGAAGGGGATTCGTGCTTTCAAATTTTCATTGGTTGAGTTTGTTAAGGAGCTTCTGAAACCAACTTGGAAAGAAGGAAAAATCACTAAAGATGATTATAAAACAATTGTGAAGAAGGTTGTAGATAAAGTAACCGGTACCATGCAGGGAGCCCATATTCCTCAGACTCAAGAGAAAATTGACCATTATTTGTCGTTTTCGAAACCAAAGCTTAACAAACTTGTACAGGCATATGTGGAAAAGGTTCACAAGGCCTAG 2472 0.4252 MSESGRKRSSKWDTRDDPEFGPDSKHLRSGWSSGDVAGSNNSKWSYMEGNDKMKPRMSKEPFSGGRGSNKDDIMNKDYRCLDAKMEWEADASYSRRRSPSPKSGWSRSGRSSRSRSPPHGFKWDSGANDRNRTRAAESKQICRDFAVGKCRRGSHCYFLHHDDQNYEDIRESKNREDGAPRYSASHESREHTLRSRSTEACVHFAKGRCRMGASCKYVHHNNSDEYGKGTLDELTRERENDGRRRDNSFEQGGGHIPSRSGDTLCKFFANGNCRNGKHCRFSHDRQDRSLRDDRWGSNLAGDHQTLDRPKLSDSASPTRRLRSDRWGTDGIMADKDKVWDSPNRNDIATYDSAKLVEEKPGNIGATEHEQTVWPVKEGWGHSLDQSSVQGEPPFLSDKKEADHWIADNAGASIPVSQSVAADIWPGDAKMSPDWNYRAGSSTRTEIEHGQNDRGLTQGSTYPATTEHDRIQVPGQGFNQNVQNVNLLHLPSCHAVGQNKVTVPILPSRAGIPEGMQKQEVSVEKKYSAEPNITGEGSSQISSSNPSTQDTVSKEQLAQLSNLSASLAHILGSGQQLPQLYAALNSHNTNDTPSLANTEVPAMPVSNTYVKPDPAVGFVKQYDPMSDSVDLNDAEASGICPVISPSKKSANIEISSLLSNTGKQNCGDTSKAPSSEEQPAKNEHLTQLQPGQNIEIQKETNEAVADDKPNPQDDHKITKENGPSENIDHNGVEANKSKDVKGIRAFKFSLVEFVKELLKPTWKEGKITKDDYKTIVKKVVDKVTGTMQGAHIPQTQEKIDHYLSFSKPKLNKLVQAYVEKVHKA 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02257 823 MobiDBLite consensus disorder prediction 1 74 - -
Arst10g02257 823 Pfam CCCH-type zinc finger 264 284 IPR041367 -
Arst10g02257 823 MobiDBLite consensus disorder prediction 33 47 - -
Arst10g02257 823 MobiDBLite consensus disorder prediction 171 195 - -
Arst10g02257 823 MobiDBLite consensus disorder prediction 659 732 - -
Arst10g02257 823 MobiDBLite consensus disorder prediction 1 24 - -
Arst10g02257 823 MobiDBLite consensus disorder prediction 659 698 - -
Arst10g02257 823 MobiDBLite consensus disorder prediction 226 261 - -
Arst10g02257 823 ProSiteProfiles Zinc finger C3H1-type profile. 136 163 IPR000571 GO:0046872
Arst10g02257 823 MobiDBLite consensus disorder prediction 96 115 - -
Arst10g02257 823 ProSiteProfiles Zinc finger C3H1-type profile. 195 222 IPR000571 GO:0046872
Arst10g02257 823 MobiDBLite consensus disorder prediction 306 324 - -
Arst10g02257 823 MobiDBLite consensus disorder prediction 284 324 - -
Arst10g02257 823 SUPERFAMILY CCCH zinc finger 196 220 IPR036855 GO:0046872
Arst10g02257 823 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 1 820 - -
Arst10g02257 823 MobiDBLite consensus disorder prediction 226 250 - -
Arst10g02257 823 ProSiteProfiles Zinc finger C3H1-type profile. 259 286 IPR000571 GO:0046872
Arst10g02257 823 MobiDBLite consensus disorder prediction 524 553 - -
Arst10g02257 823 Pfam RNA-binding, Nab2-type zinc finger 200 219 - -
Arst10g02257 823 Pfam RNA-binding, Nab2-type zinc finger 141 160 - -
Arst10g02257 823 MobiDBLite consensus disorder prediction 531 553 - -
Arst10g02257 823 SMART c3hfinal6 195 221 IPR000571 GO:0046872
Arst10g02257 823 SMART c3hfinal6 259 285 IPR000571 GO:0046872
Arst10g02257 823 SMART c3hfinal6 137 162 IPR000571 GO:0046872
Arst10g02257 823 MobiDBLite consensus disorder prediction 284 298 - -
Arst10g02257 823 Gene3D - 131 233 - -
Arst10g02257 823 MobiDBLite consensus disorder prediction 90 137 - -
Arst10g02257 823 MobiDBLite consensus disorder prediction 699 722 - -
Arst10g02257 823 Gene3D - 254 294 - -
Arst10g02257 823 SUPERFAMILY CCCH zinc finger 262 284 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02257 Arst-Chr10 80329168 80335610 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Arst10g02257 zf-CCCH_4 7.5e-08 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02257 - K22909 gmx:100783856 979.163