Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02239 ATGGTGGTCAGTTTTACTGGTTCGACGGAGACTGGCCGGAAGGTAATGATGGCGGCAACCATGAGCAATTTGAAACCAGTTTCACTTGAATTAGGTGGCAAGTCCCCAGTCTTGATCTTTGATGATGCTGATGTTGACAAAACTGTATCTCGGTCGTCCCTAGTAACTGTTTATAATTTTCAGGGAGAAATATGTGTTGCATTTTCCAGAGTTTATGTTCAAGAAGGAATTTATGATGAATTTGAGAAGAAGGTCGTGGAGAAGGCAAAAACATGGGTAGTAGGAGATCCATTTGACCCTAAAATTCAGCAAGGATCACAGACTAGTAAGGCACAGTTTGAGAAAATTCTGTCCTATATTGAGCTTGGAAAGAAAGAAGGAGCTACCCTTTTAACTGGGAAAAAGGATTTGGAAACAAGGGAGGACATGCTAATATCACAAGATGAGATATTTGGACCTGTCATGACTTCTCGCTTACTTCTGCCTAGGCGAGTGAGTCACATGCTTCGACCACCGGACGCCATCCTCCTGTATTTGAGTGAGACTGCCTTCGGCAACACGGTGTCTCTCAAGGACTTCATTTTTGACAACTCCTTGATCACGACATTTGTGGAGCGTTGA 621 0.4332 MVVSFTGSTETGRKVMMAATMSNLKPVSLELGGKSPVLIFDDADVDKTVSRSSLVTVYNFQGEICVAFSRVYVQEGIYDEFEKKVVEKAKTWVVGDPFDPKIQQGSQTSKAQFEKILSYIELGKKEGATLLTGKKDLETREDMLISQDEIFGPVMTSRLLLPRRVSHMLRPPDAILLYLSETAFGNTVSLKDFIFDNSLITTFVER 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02239 206 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 29 36 IPR029510 GO:0016491
Arst10g02239 206 Pfam Aldehyde dehydrogenase family 2 156 IPR015590 GO:0016491
Arst10g02239 206 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 3 156 - -
Arst10g02239 206 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 58 69 IPR016160 GO:0016491
Arst10g02239 206 SUPERFAMILY ALDH-like 2 156 IPR016161 GO:0016491
Arst10g02239 206 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 33 156 IPR016163 GO:0016620
Arst10g02239 206 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 3 32 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02239 Arst-Chr10 79457830 79462349 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02239 3 156 Aldehyde Dehydrogenase Gene Family AT3G24503 62.874 1.63e-62 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02239 K12355 - adu:107470374 402.519