Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02233 ATGTATGCTTCAACTTCATTCACTTCACCTCTGATCCATGAACTTCTTTTAGAATTCCACTCAAGAAGGTTACTCTTACACACTACCCCATCATTCAACCAATCACCAAGCTCATCACCCAACCCACCAAATAGCCCCCAAAACTCATCACCACAATCATCATACCTTGGAGATGGAACCTTTGATGCAAATGTTGTCATGGTACTCTCAGTACTTTTATGTGCTCTAATATGCTCACTTGGATTAAACTCCATCATAAGGTGTGCATTAAAGTGTTCCAGCTTAGTTGTGAGTACCAATAATAGTGATAGTAATAATAACCACCACACTCCATCATCAAGAGTGGTCAACACCGGAATCAAGAAGAAAGCACTCAAGACTTTTACAACACTAAGTTACTCAAATGAATTCAACCTTCCTAGTTTGGACTCAGAGTGTGTGATATGCTTGTCGGATTTCGCCATCGGCGACCGGTTGCGGATTTTGCCTAAGTGCAACCATGGTTTCCACATAAAGTGCATTGATAAATGGTTGAGTTCGCATTCTTCTTGCCCCAAATGCAGACACTGCCTTATGGAGACTTGCCACAAGATTATTGGGGCTACTACCTCATCAACATCATCACAATTGCCAGAAACTATTCTTACCATAGCACCATTGGACCCAGAACGTTTGGTGCGTAACTATAGGGAATCCAATTAA 702 0.4145 MYASTSFTSPLIHELLLEFHSRRLLLHTTPSFNQSPSSSPNPPNSPQNSSPQSSYLGDGTFDANVVMVLSVLLCALICSLGLNSIIRCALKCSSLVVSTNNSDSNNNHHTPSSRVVNTGIKKKALKTFTTLSYSNEFNLPSLDSECVICLSDFAIGDRLRILPKCNHGFHIKCIDKWLSSHSSCPKCRHCLMETCHKIIGATTSSTSSQLPETILTIAPLDPERLVRNYRESN 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02233 233 MobiDBLite consensus disorder prediction 30 53 - -
Arst10g02233 233 FunFam RING-H2 finger protein ATL73 107 193 - -
Arst10g02233 233 ProSiteProfiles Zinc finger RING-type profile. 146 188 IPR001841 -
Arst10g02233 233 SMART ring_2 146 187 IPR001841 -
Arst10g02233 233 CDD RING-H2_EL5-like 145 188 - -
Arst10g02233 233 Pfam Ring finger domain 145 188 IPR001841 -
Arst10g02233 233 SUPERFAMILY RING/U-box 126 193 - -
Arst10g02233 233 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 104 193 IPR013083 -
Arst10g02233 233 PANTHER RING-H2 FINGER PROTEIN ATL78 15 225 IPR044602 GO:0016567|GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02233 Arst-Chr10 79117393 79118376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02233 44 192 C3H Transcription Factor Family AT3G10910 43.709 2.03e-40 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02233 K19040 - gmx:100807227 296.204