Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02225 ATGGAAAACTCAACCTTACCGGAAAATAGCATAGAGAACAGGAAGGTGGCGGTAGCGGCGGCGGAAGGCGACAGCGTATCGTCCGATGGTTTGAAAGGCGAAGATGGTGAGCGGAACTCAAGCGGCGCGAACCGGTGGCCGCGAGAAGAGACAATGGCTTTGATAAAAATTAGGTCTGAAATGGACGGCGCCTTCAGAGACATCAGCCCCAAAGGCCCTCTTTGGGAACAAGTCTCAAGGAAATTAGGTGAGCTGGGATATGAAAGGAGTGCGAAGAAGTGTAAAGAGAAGTTTGAGAATATTTACAAGTACCATAGGAGGACCAAGGAAGGCCGTTCCGGAAAGCGTAACGGAAAAACTTACCGTTTCTTTGATCAACTAGAAGCATTAGACCCGCACCCTAACAATAACGCCGTTATTCAAGATGCGGTTCCATGTTCCGTTAGGTTTCCGGTTACTGCAATGGAGCATTCCAGTTCCGCCACTTCGTCTTACTCGAGCGGCGGGGGTGAAGACGAAGGTGAAGGGAGGAGGAGGAAGAAGAAGAGGAGGCTGAGGCTGTTCTTTGAGGGGCTTATGAGGGAGGTTTTGGAGAAGCAAGAGAGCCTGCAGAGGAAGTTCATGGAAGTTCTCGATAAGTGCGACCAGGATCGAATGGCGAGGGAGCAAGCATGGAAGACGGAGGAGCTTGCCAGGATCAAGAAGGAGCGCGAGCTTCTCGCTCAGGAACGGTCGATTGCCGCCGCCAAGGACGAAGCGGTTATGTCCTTCATAAGAAAGTTTGCAGAAAACAGCAACAACAATGGCGCGCTGCAATTTCCAGCTGATAATAATAACCACCTCCAGGAGCAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAAGACGAAGTTGGGAATGGCATCAATGTTGGGAATTTTGTGCACATGAGCTCTTCGCGGTGGCCGAAGGATGAAGTAGAGGCATTGATAAGGCTGAGGACACAAGTGGATGAGCAGTTACAGCAGCAGCAAGGGAACAAGGGACCGCTTTGGGAGGAGGTGTCTACGGCCATGAAGGGACTCGGATACGATCGGAGCGCAAAGAGGTGCAAGGAGAAGTGGGAGAACATCAACAAGTACTTCAAGAGAATGAAGGAGAAGAACAAGAGGAAGCCCGAGGACTCTAAAACATGTCCCTATTATCACCATCTTGAGGCCATATACAGCAAGAAGCCCAAGAACAATAACAAGCTTGATGATAATGATAATGACAAGAAGAACGAGTTGAAGCCTGAAGAGCTTTTGATGCATATCATGAATGGTCAAGAAGAGAGGCAGCAGGATCCAGATCAAGATCAGTCTTCATCTGAAGATGCAGACAGAGACAACCATAATGGATATCAGATGCTTGATAATAGTCCTTCTTCCATAGCAATCATGAGTTAA 1425 0.4884 MENSTLPENSIENRKVAVAAAEGDSVSSDGLKGEDGERNSSGANRWPREETMALIKIRSEMDGAFRDISPKGPLWEQVSRKLGELGYERSAKKCKEKFENIYKYHRRTKEGRSGKRNGKTYRFFDQLEALDPHPNNNAVIQDAVPCSVRFPVTAMEHSSSATSSYSSGGGEDEGEGRRRKKKRRLRLFFEGLMREVLEKQESLQRKFMEVLDKCDQDRMAREQAWKTEELARIKKERELLAQERSIAAAKDEAVMSFIRKFAENSNNNGALQFPADNNNHLQEQEKEKEKEKEKDEVGNGINVGNFVHMSSSRWPKDEVEALIRLRTQVDEQLQQQQGNKGPLWEEVSTAMKGLGYDRSAKRCKEKWENINKYFKRMKEKNKRKPEDSKTCPYYHHLEAIYSKKPKNNNKLDDNDNDKKNELKPEELLMHIMNGQEERQQDPDQDQSSSEDADRDNHNGYQMLDNSPSSIAIMS 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02225 474 Pfam Myb/SANT-like DNA-binding domain 44 130 IPR044822 -
Arst10g02225 474 Pfam Myb/SANT-like DNA-binding domain 312 400 IPR044822 -
Arst10g02225 474 CDD GT1 44 109 - -
Arst10g02225 474 FunFam Trihelix transcription factor GT-2 314 376 - -
Arst10g02225 474 MobiDBLite consensus disorder prediction 1 49 - -
Arst10g02225 474 MobiDBLite consensus disorder prediction 157 180 - -
Arst10g02225 474 MobiDBLite consensus disorder prediction 401 458 - -
Arst10g02225 474 MobiDBLite consensus disorder prediction 268 308 - -
Arst10g02225 474 MobiDBLite consensus disorder prediction 280 298 - -
Arst10g02225 474 ProSiteProfiles Myb-like domain profile. 38 102 IPR001005 -
Arst10g02225 474 MobiDBLite consensus disorder prediction 459 474 - -
Arst10g02225 474 SMART sant 42 104 IPR001005 -
Arst10g02225 474 SMART sant 310 373 IPR001005 -
Arst10g02225 474 MobiDBLite consensus disorder prediction 401 474 - -
Arst10g02225 474 FunFam Trihelix transcription factor GT-2 46 107 - -
Arst10g02225 474 Coils Coil 232 252 - -
Arst10g02225 474 Gene3D - 46 107 - -
Arst10g02225 474 Gene3D - 314 376 - -
Arst10g02225 474 ProSiteProfiles Myb-like domain profile. 312 371 IPR001005 -
Arst10g02225 474 CDD GT1 312 378 - -
Arst10g02225 474 MobiDBLite consensus disorder prediction 28 44 - -
Arst10g02225 474 PANTHER FI21293P1 20 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02225 Arst-Chr10 78748528 78751312 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02225 179 407 Trihelix Transcription Factor Family AT1G76890 46.091 3.67e-65 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Arst10g02225 Myb_DNA-bind_4 2.4e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02225 - - aip:107623117 828.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g02225 10 78748528 78751312 Arst10g02225 10 78748528 78751312 ECH