Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02218 ATGTCCATGCGCCCCTTCCTCCCCAAATGCCTCTTCTTCAGCTCTTCGCCAGCTCGTGCTCTTCTTCTTCCACTTCAACTCAGCCAATTCTCGTCTTCGTCGCATTCGCCTTCGTATCATCCGAGACGGTTAGAGGAGGAGTCACGCCACGTGAGGGTGTCGGTGTGGTGGGATTTCGAGAACTGCCAAGTGCCGAACACCATCAACGTCTCCAAGATCGCCACCGTCATAACGGAAGCCGTTAGAGCCAACGGTATTAAGGGGCCCGTCCATATAACGGCCTTCGGGGATGTCTTGCAGCTTTCTAGATCCAACCAGGAGGCACTTTCTTACACCGGCATTCATCTCGCCCACGTTCCCAATGGTGGAAAGAATAGTGCTGATAGATCTCTTCTTATTGATCTAATGTGTTGGGTTTCTCAAAACCCGCCACCTGCGCATCTCTTTCTGATTTCTGGGGATAAAGACTTTGCTGGCATATTGCACCGCTTAAGAATGAATAACTACAACATCCTGCTTGCAACTCCAGGATCAGCTTCTGATGTGCTATGCGCTGCAGCAACTATAATGTGGCACTGGCCATCTTTGCTTAAGGGAGAAGAACTTACTGGAAAGCATTTCAATCATCCTCCAGATGGCCCTGTTAGTTCTTGGTATGGAAATTATAAGGTGCCTCTTGAAAATCCCTTCTCAGCTAGTGAGCAGTCTGCATCTTGTCAAAAAGCAGAAAGCTGTGAATCTCCCCCAATTCCTAAGTCAGTTGCAAGGCAGGTTAGGAAAATATTAAGTTCGCATCCAAAAGGGATGTCCATTACAGATTTTCGTGCGGAGTTGGCTAAAAATAATGTGCAATTGGAGAAATCATTCTATGGACAGAAAAAGTTTTCCCGTTTTCTTCTATCAATACCACACGTACAGCTCAAGCATTTAGATGGTGTTTATTTTGTGTGTTTGGCTCCCTCAGAGTTTCCCAAACCCCTTGCAAGCAATGATGGGCCATCAAAAACACCTGCTGTTGGGAATGAAACACCTCAAAAGTTGAATGGTGAGAGTAAAAATATGCCTAGAGATGCAGATAGGACGCCTTCAATGCCCTCATTGCATGAAAGGAGTAGTGAGAAGATTGGGAATATGACTGATGCACGATTGTCTAAGGTTCAACTGCCACAAAAAGACAAGGAAGTTTCACAATTTAAGGCAGATAATGAGATTGTAACGCCTGACAAGATAGGTCTCAATAAATCTGGAAAACCTACTTCATCAGATGACCACTCTGCTCAGAACACATTGGTAGAAAACAATCTTGTTGATGATGAATCTGGAAAATATATAGCTGAGTACAAAAATGAGGGGCCAACTAGAGGGGATGCTGATGAGGTTTGTCAAAGCTCTTATTCTTTGCCAGTTGATGACTTCATGGTTGACAAGAGGCATGGTGGGAGTGTTGAAACTCATAGCAAAAGTTCAATATTTGGTTGGATTAGAAGTTGGTTTCCATTTTGGAAAAGAAATGCTAAATCTGATGATTTAACCACTAATAAGACCAGCATGGATAGTCACTCTGAGTTTGAGGAGCCCAAGTTATCTCAACTGGACATGGCAGTAAGTCATTCGGAGGAGCCCAAGCTATGTCAACCAGACATGGCTATAGACGAGACTATAAAACATTCTGAGGAGTCCAAGCTATCCGAACAGAACCAGAGTGTTATTCATGCCGAAGAGCCGAAAATATCAGATCAGGCGCCCATGTTATCTGAGCCAAACCAGATTGTTAGTCATTCTGTAGAGACCAAATTATGTGATCGGGACCAGACTGTTTCTCAGTCTGTAGAGGCCAACACATCAGAAGTGAACCAGAATGTTGGTCATTCTGACAAGCCCAAGTTATTTTTTAGAGATTCCTTTTGGAATTACATGGAATCTTTTGTTTTTACCACCCAAGGATCAGTTCTCGTCTCCCTGTCAACAAGCAGGGAGGATTTGGCACAAAAATTACAAAAGGGCGGTCCTGCGGTTCTCAAGTCTCTCACTGAAAAGGATATTCTTCAACTGATTGATTTATTAATAGCAGACAAGAAATGGTTGGAAGTAAGCAGCTCCACAAACTACCCATTTAAGGTGACTCGACCAGTTCAGAAGAACTCATCTATGGGCCTTTCTCATGGTGCGAATGGCCTTCGATCTCTCTTTTTAAATAGAACATCACAGTCCAACCTGCAGAAATTACTTGAACATGATGCAGAGAAACACAATCAGAATACTCCTCATACTAGTGTTTTGAAACTTGCCACTGAAAAACTATATGCTGAGAGGTCTAGAAATGATATATTAGTAGACTGCCAAAAAGTTGTGGATGAAATATTGAGAATCCACCCAGAGGGATACAATATTGGTTGTTTCCGAAAACTATTTTATGAGATGTGTGGCTATCATATTAGTTTACAGAAGCTCGGTTATAAAAATTTGGCATCCTTATTGCAGACAATGCAGGGAGCTAAATTAGAGTCCACTAATATTTTTCCTTCAGATAGTGAATTGTCTGGTTCAGCTCCAAAGGATGATAGCATGGACTCTCCATGGGAAGAATTAGGTCCTATTTCTGCCAACAATTCTGACCAGAGTGATGTGGAGTCAGAATTAAGTAGGAATGCCAAAGAACTGGATACCTCAAAGTATCCTGATTATGAACCTGTTGGCTTAGATTATGATCCTTCTGAGTCTGAAGAAGATAGTAGCTGTTTAACTCAACCAGAAGAGCAAGGAAAGCCAAGATGTAATGAGCAAGACAGTTCTCTTCTCAAAGTTTTGGATTTCTGGCACTGTAGAAAGGAAGGAGAGAATAGTGCAAAGAATTCAGATAGTGTTGACATCTTTAATAATGATTCTCTGAAAAGGATTTTGAATCCATCGGGCGAGTCATCTCAGGGTGCCCTTTCCAAAATTCCTTCAGGGAACTATAAAGAGAAGCATAGTTCTCGAAAGAGCTATTCATTTGTAGCTGATCCACTTTTATCCCCGAAGGACAAACTGATTGATGGGATGCTTGATGGCTTCAAGAAAACAGATGAGTCTAAGATGCAAAATTGA 3087 0.4231 MSMRPFLPKCLFFSSSPARALLLPLQLSQFSSSSHSPSYHPRRLEEESRHVRVSVWWDFENCQVPNTINVSKIATVITEAVRANGIKGPVHITAFGDVLQLSRSNQEALSYTGIHLAHVPNGGKNSADRSLLIDLMCWVSQNPPPAHLFLISGDKDFAGILHRLRMNNYNILLATPGSASDVLCAAATIMWHWPSLLKGEELTGKHFNHPPDGPVSSWYGNYKVPLENPFSASEQSASCQKAESCESPPIPKSVARQVRKILSSHPKGMSITDFRAELAKNNVQLEKSFYGQKKFSRFLLSIPHVQLKHLDGVYFVCLAPSEFPKPLASNDGPSKTPAVGNETPQKLNGESKNMPRDADRTPSMPSLHERSSEKIGNMTDARLSKVQLPQKDKEVSQFKADNEIVTPDKIGLNKSGKPTSSDDHSAQNTLVENNLVDDESGKYIAEYKNEGPTRGDADEVCQSSYSLPVDDFMVDKRHGGSVETHSKSSIFGWIRSWFPFWKRNAKSDDLTTNKTSMDSHSEFEEPKLSQLDMAVSHSEEPKLCQPDMAIDETIKHSEESKLSEQNQSVIHAEEPKISDQAPMLSEPNQIVSHSVETKLCDRDQTVSQSVEANTSEVNQNVGHSDKPKLFFRDSFWNYMESFVFTTQGSVLVSLSTSREDLAQKLQKGGPAVLKSLTEKDILQLIDLLIADKKWLEVSSSTNYPFKVTRPVQKNSSMGLSHGANGLRSLFLNRTSQSNLQKLLEHDAEKHNQNTPHTSVLKLATEKLYAERSRNDILVDCQKVVDEILRIHPEGYNIGCFRKLFYEMCGYHISLQKLGYKNLASLLQTMQGAKLESTNIFPSDSELSGSAPKDDSMDSPWEELGPISANNSDQSDVESELSRNAKELDTSKYPDYEPVGLDYDPSESEEDSSCLTQPEEQGKPRCNEQDSSLLKVLDFWHCRKEGENSAKNSDSVDIFNNDSLKRILNPSGESSQGALSKIPSGNYKEKHSSRKSYSFVADPLLSPKDKLIDGMLDGFKKTDESKMQN 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02218 1028 MobiDBLite consensus disorder prediction 878 892 - -
Arst10g02218 1028 CDD LOTUS 251 318 - -
Arst10g02218 1028 Gene3D - 771 837 IPR041966 -
Arst10g02218 1028 CDD LOTUS 779 829 - -
Arst10g02218 1028 CDD PIN_limkain_b1_N_like 52 176 - -
Arst10g02218 1028 Gene3D - 251 318 IPR041966 -
Arst10g02218 1028 MobiDBLite consensus disorder prediction 840 928 - -
Arst10g02218 1028 Gene3D - 44 193 - -
Arst10g02218 1028 Pfam NYN domain 52 187 IPR021139 GO:0004540
Arst10g02218 1028 ProSiteProfiles OST-type HTH domain profile. 250 320 IPR025605 -
Arst10g02218 1028 ProSiteProfiles OST-type HTH domain profile. 776 852 IPR025605 -
Arst10g02218 1028 MobiDBLite consensus disorder prediction 328 373 - -
Arst10g02218 1028 PANTHER LIMKAIN B LKAP 34 785 IPR024768 GO:0005777|GO:0010468
Arst10g02218 1028 MobiDBLite consensus disorder prediction 967 998 - -
Arst10g02218 1028 MobiDBLite consensus disorder prediction 967 981 - -
Arst10g02218 1028 Pfam OST-HTH/LOTUS domain 251 309 IPR025605 -
Arst10g02218 1028 Pfam OST-HTH/LOTUS domain 781 831 IPR025605 -
Arst10g02218 1028 MobiDBLite consensus disorder prediction 334 350 - -
Arst10g02218 1028 MobiDBLite consensus disorder prediction 352 367 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02218 51 199 C2H2 Transcription Factor Family AT5G61190 45.638 5.39e-37 149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g02218 10 78465487 78470342 Arst10g02218 10 78465487 78470342 ECH